Gene Information

Name : NH8B_0055 (NH8B_0055)
Accession : YP_004845318.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 61105 - 62247 bp
Length : 1143 bp
Strand : -
Note : K01758

DNA sequence :
ATGCGTTTCTCCACCAAGGCCATCCACGCCGGGCTGGCGCCAGACCCGTCCACCGGCGCCGTCATGACCCCGGTCTACCT
GACCTCCACCTTCGCGCAGCAGGCCCCCGGCGTGCACCAGGGCTACGACTACGCGCGCACCGCCAACCCCACGCGCAGCG
CGCTGGAAGCCAACCTGGCCGCACTGGAGGAAGGCGCCTACGGCCTGGCGTTCGCCAGCGGCCTGGCGGCGGCGACGGCC
GTGCTGCAGACGCTGTCGAGCGGCGACCACGTGCTGTGCGGGCAGGACCTGTACGGCGGCACCTACCGCCTGATGACCCA
GGTGTTCGCCCGCTTCGGCATTGCCTCCAGCTTCGTCGACGCCACCGACCCGGCGGCGGTCGCCGCCGCCTTCACCCCCG
CCACCAAGCTGCTGTGGCTGGAGACGCCGAGCAACCCGCTGCTGACGGTGTGCGACATCGCCGCGCTGGCCCGGCTGGCG
CACGCGCACGGCGTCACGGTGGTGGTGGACAACACCTTCGCCTCGCCCTACCTGCAGCAGCCGCTGACACTCGGCGCCGA
TGTGGTGCTGCACAGCACCACCAAGTACCTGGGCGGCCACTCCGACGTGGTCGGCGGCGCGCTGGTGACCAACGACGAGG
CGCTGTACCAGACGCTCAAGTTCCTGCAGAACGCGGTCGGCGCGGTGCCGGGGCCGATGGACTGCTTCCTGGTGCTGCGC
GGCATCAAGACGCTGGCGCTGCGCATGCGCCAGCACTGCGCCAACGCGCTGGAACTGGCGCAGCACCTGGCGGAGCACCC
CGAGGTGCTGCGCGTGCACTACCCCGGCCTGCCCGACAGCCCCTGGCACGAGCTGGCGCGGAGCCAGATGTACGCCTTCG
GCGGCATGATCTCGCTGGAACTCCAGGGTGGCGCCGAGCGCAGCGCCCGCTTCACCAGCCGCACCCGGCTGTTCACGTTG
GCCGAAAGCCTGGGCGGCGTCGAGTCGCTGGTCAGCCTGCCCACCGCCATGACTCACGCCGCCATCCCGCCCGAGCAGCG
CCACAAGGCCGGCCTGCCCGACGCGCTGGTACGGCTGTCGGTGGGGCTGGAAGACGTCGAAGACCTGATCGAGGACATCG
ACCAGGCGATCGCGGCAACGTGA

Protein sequence :
MRFSTKAIHAGLAPDPSTGAVMTPVYLTSTFAQQAPGVHQGYDYARTANPTRSALEANLAALEEGAYGLAFASGLAAATA
VLQTLSSGDHVLCGQDLYGGTYRLMTQVFARFGIASSFVDATDPAAVAAAFTPATKLLWLETPSNPLLTVCDIAALARLA
HAHGVTVVVDNTFASPYLQQPLTLGADVVLHSTTKYLGGHSDVVGGALVTNDEALYQTLKFLQNAVGAVPGPMDCFLVLR
GIKTLALRMRQHCANALELAQHLAEHPEVLRVHYPGLPDSPWHELARSQMYAFGGMISLELQGGAERSARFTSRTRLFTL
AESLGGVESLVSLPTAMTHAAIPPEQRHKAGLPDALVRLSVGLEDVEDLIEDIDQAIAAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-67 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-68 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-49 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_0055 YP_004845318.1 cystathionine gamma-lyase BAC0207 Protein 2e-55 47