Gene Information

Name : NH8B_3984 (NH8B_3984)
Accession : YP_004849135.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 4177542 - 4179530 bp
Length : 1989 bp
Strand : +
Note : K00615

DNA sequence :
ATGGTCTCCCGTACCGAGCTTGCCAACGCCATCCGCTTTCTCGCCATGGACGCGGTGGAACAGGCCAAATCCGGTCACCC
CGGCGCCCCGATGGGCATGGCTGACATCGCCGAAGTCCTGTGGCGCGATCACCTGAAGCACAATCCGGCCAACCCGCACT
GGTCCAACCGCGACCGCTTCGTGCTCTCCAACGGCCACGGCTCGATGTTGCTGTACAGCCTGCTGCACCTGACCGGTTAC
GACCTGTCGATCGAGGACCTCAAACACTTCCGCCAGCTGCACTCCAAGACCCCGGGCCACCCGGAATACGGCTACGCCCC
CGGCATCGAGACCACCACCGGCCCGCTGGGCCAGGGCATCACCAATGCCGTCGGCATGGCGCTGGCCGAGAAGATGCTGG
CCGCCGAGTTCAACCGCGAAGGCTTCCCGGTGGTCGATCACACCACCTGGGCGTTCCTCGGCGACGGCTGCCTGATGGAA
GGCATCTCGCACGAGGCCTGCTCGCTGGCCGGCACCTGGGGCCTGGGCAAGCTGGTGGCATTCTGGGACGACAACGGCAT
CTCCATTGACGGCGATGTCGAAGGTTGGTTCACCGACGACACCCCGGCGCGCTTCGAAGCCTACGGCTGGCAGGTGATCC
GCAACGTCGACGGCCACGATGCCGAGGAAATCCAGACCGCGATCCAGACCGCCAGGAAAACCGCCGACCGCCCGACCCTG
ATCTGCTGCAAGACCGCCATCGGCAAGGGCGCCCCGAACAAGCAGGGCGGCCACGACGTGCACGGCGCGCCGCTGGGCGC
GGCCGAGATCGCCGCCGCGCGCGAACACCTCAACTGGCCGCACGCGCCGTTCGAGATTCCGGCCGAGATCTACACCGCCT
GGGGCGCGCGCGACGCCGGCGCGGCGCGCGAGAACGAGTGGAACGGCCTGTTCGCGCACTACCGCGCGGCCTACCCGGAA
CTCGCCGCCGAATTCGAACGCCGCATGCAGGGCGAGCTGCCGCGGGGCTGGGAAGACGCCAAGGCCGCCGCCATCGCCAA
GATCAACGACGCCGCCCAGACCGTGGCCACGCGCAAGGCGAGCCAGATCGCGCTTGAGACGTTCTCGCCGCTGCTGCCGG
AATTCGTCGGCGGTTCGGCCGACCTGACCGGTTCCAACCTGACCAACTGGTCCGGCTCGAAGTGGATCGACGCCCAGGGC
AACGGCAACTACATCAGCTACGGCGTGCGCGAGTTCGGCATGGCCGCGATCATGAACGGCATGACGCTGCACGGCGGCCT
GCGCCCGTACGGCGGCACCTTCCTGATGTTCAGCGAATACGCCCGCAACGCGCTGCGCATGGCCGCGCTGATGAAGATCA
ACCCGATCTTCGTGTTCACCCACGACTCGATCGGCCTGGGCGAAGACGGCCCGACCCACCAGCCGGTGGAGCAGGTCGCC
ACGCTGCGCTACATCCCCAACATGAATACCTGGCGTCCGTGCGACACCACCGAGGCCGCCGTGGCCTGGGCGCACGCCAT
CGAACAGAAGACCACCCCGACCAACCTGATCCTGAGCCGCCAGAACCTGCCGTTCGTGACGCGCGACGCCCAGCAGATCG
CCGACATCGCGAAGGGCGGCTACGTGCTGCGCGAAGCAGCAGGCGAGCTGAAGGCGGTGCTGATCGCCACCGGCTCCGAA
GTGGAACTGGCGCTCAAGGCCCAGGCCGCGCTGGCCGAACAGGGCGTGGCGGTGCGCGTGGTGTCGATGCCGTCGACCAA
CGTGTTCGACAAGCAGGACAAGGCCTACCAGGCCAGCGTGCTGCCCGCCGGCGTGCCGCGCGTGGCGATCGAGGCCGGCG
TGAGCGACTTCTGGCGCAAGTACGTGGGCCTGGAAGGCGCCGTGGTCGGCATCGACCACTTCGGCGAATCCGCCCCGGCC
TCCGTGCTGTTCAAGGAATTCGGCTTCACCGTCGACAACGTGGTGGCCCAGACCCTGGCCGTCATCTGA

Protein sequence :
MVSRTELANAIRFLAMDAVEQAKSGHPGAPMGMADIAEVLWRDHLKHNPANPHWSNRDRFVLSNGHGSMLLYSLLHLTGY
DLSIEDLKHFRQLHSKTPGHPEYGYAPGIETTTGPLGQGITNAVGMALAEKMLAAEFNREGFPVVDHTTWAFLGDGCLME
GISHEACSLAGTWGLGKLVAFWDDNGISIDGDVEGWFTDDTPARFEAYGWQVIRNVDGHDAEEIQTAIQTARKTADRPTL
ICCKTAIGKGAPNKQGGHDVHGAPLGAAEIAAAREHLNWPHAPFEIPAEIYTAWGARDAGAARENEWNGLFAHYRAAYPE
LAAEFERRMQGELPRGWEDAKAAAIAKINDAAQTVATRKASQIALETFSPLLPEFVGGSADLTGSNLTNWSGSKWIDAQG
NGNYISYGVREFGMAAIMNGMTLHGGLRPYGGTFLMFSEYARNALRMAALMKINPIFVFTHDSIGLGEDGPTHQPVEQVA
TLRYIPNMNTWRPCDTTEAAVAWAHAIEQKTTPTNLILSRQNLPFVTRDAQQIADIAKGGYVLREAAGELKAVLIATGSE
VELALKAQAALAEQGVAVRVVSMPSTNVFDKQDKAYQASVLPAGVPRVAIEAGVSDFWRKYVGLEGAVVGIDHFGESAPA
SVLFKEFGFTVDNVVAQTLAVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 69
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 64