|
Name : NH8B_3694 (NH8B_3694) Accession : YP_004848856.1 Strain : Pseudogulbenkiania sp. NH8B Genome accession: NC_016002 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3880928 - 3882211 bp Length : 1284 bp Strand : - Note : - DNA sequence : GTGCCGGATCGCAAAGTCTCTGTCGTTGGCCTGGGCTACGTGGGCCTTCCTGTCGCCGTTGCCTTCGGCCAGAAAAGCCG TGTGATCGGCTTCGACATCAACCTGCAACGCCTGACTGAGCTCAGGGGCGGACATGATCGTACCTTGGAGGTGGCCGATG CGGAATTGGCTGCCGCCGATATCGTCTACACCGACGACATCGCGGTGCTGGCCGAGGCCGATTTTCATATCGTCGCTGTG CCGACCCCCGTTGACGATGCGCATCAACCTGACCTGACGCCGGTAGAGAAAGCGTCCGAGAGTGTCGCCAAGGCGCTGCG TCCCGGTGCGATCGTGGTGTACGAATCCACCGTCTATCCGGGGGTGACCGAGGAAGTCTGCGTACCGATCCTGGAGCGGG TGTCCGGTCTCAAGTGCGGGGTGGATTTCACCGTCGGTTACAGTCCGGAGCGTATCAATCCGGGCGATAAGGAACACACC TTCACCAAGATCAAGAAGGTCGTCTCCGGTCAGGATGCGGCAACGCTCGAGATTGTCGCGGATGTATATGGCTCGGTGGT AACAGCCGGCGTGCACAAGGCCTCGTCGATCAAGGTGGCCGAGGCTTCCAAGGTGATCGAGAATACCCAGCGCGATCTCA ACATCGCCTTGATGAACGAGCTGGCTGTGCTGTTCGAGAAGATGGGCATCGACACGCTGGACGTGCTGGAAGCGGCCGGT ACCAAGTGGAACTTCCTGCCGTTCCGCCCGGGGCTGGTGGGCGGCCACTGCATCGGCGTCGACCCATACTACCTCACTTA CAAGGCCGAGCAACTGGGCTACATCCCGCAGGTGATCCATGCCGGACGCCGCATCAACAATGGCATGGGCACCTTCATCG CCCAGCGCACCATCAAGGAGATGATCCATGCCGGCATCAACATCCTCGGCAGTACCGTCACGGTGCTAGGCCTGACCTTC AAGGAAAACTGCCCTGATCTGCGTAATTCGCGCGTGATCGACGTGGTTACCGAACTGCGCGAGTTCGGTGTCCAGGTACA GGTGGCTGATCCGCAGGCCGATGCCGCCCAGGCTCACCACGAGTATGGCGTCGATCTGGTGCCGATGGCGCAATTGGTCC CGGCGGATGCGGTGATCGTTGCGGTGGCACATCACGAGTTCGCCGAGTTCTCGGCTGCTGACTGGCTGAGCCAATGTCGT GGCGTACCGGTCATCATCGATGTCAAGGGGAAGCTTGATAAGGCTGCGCTGGCGGAGGCCGGGGCGCGTTACTGGCGCCT GTGA Protein sequence : MPDRKVSVVGLGYVGLPVAVAFGQKSRVIGFDINLQRLTELRGGHDRTLEVADAELAAADIVYTDDIAVLAEADFHIVAV PTPVDDAHQPDLTPVEKASESVAKALRPGAIVVYESTVYPGVTEEVCVPILERVSGLKCGVDFTVGYSPERINPGDKEHT FTKIKKVVSGQDAATLEIVADVYGSVVTAGVHKASSIKVAEASKVIENTQRDLNIALMNELAVLFEKMGIDTLDVLEAAG TKWNFLPFRPGLVGGHCIGVDPYYLTYKAEQLGYIPQVIHAGRRINNGMGTFIAQRTIKEMIHAGINILGSTVTVLGLTF KENCPDLRNSRVIDVVTELREFGVQVQVADPQADAAQAHHEYGVDLVPMAQLVPADAVIVAVAHHEFAEFSAADWLSQCR GVPVIIDVKGKLDKAALAEAGARYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-118 | 60 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-101 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-101 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NH8B_3694 | YP_004848856.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-101 | 55 |
