|
Name : NH8B_3567 (NH8B_3567) Accession : YP_004848732.1 Strain : Pseudogulbenkiania sp. NH8B Genome accession: NC_016002 Putative virulence/resistance : Virulence Product : Orn/Lys/Arg decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 3744112 - 3746376 bp Length : 2265 bp Strand : + Note : K01584 DNA sequence : ATGCGTTTCCATTTCCCCATCGTCATCATCGACGAAGACTTCCGTTCCGAAAACACCAGCGGCTCCGGCATCCGCGAGCT GGCCGCTGCGATGGAGAAGGAAGGCATGGAAGTCGTGGGTTATACCAGCTACGGCGATCTGACGTCGTTTGCCCAGCAGC AGAGCCGCGCCGCCGGCTTCATCCTGTCGATCGACGACGAGGAGTTTGGCTCCGGCACGCCGGAAGAGGCGCTGGATGCG CTGGCCAATCTGCGCAACTTCGTGGCCGAGATTCGCCGCCGCAACCCGGATATCCCGCTCTACCTGTACGGCGAGACGCG CACGGCGCGCCACATCCCCAACGACATCCTGCGCGAGCTGCATGGTTTCATCCACATGCACGAGGACACCCCGGAGTTCG TGGCGCGCCACATCATCCGCGAAGCCAAATCGTACCTGGACACGCTGGCGCCGCCGTTCTTCCGCGCCCTGGTGCATTAC GCCCACGACGGTTCCTATTCCTGGCACTGCCCGGGCCACTCCGGCGGCGTGGCGTTCCTGAAGAGCCCGGTGGGCCAGAT GTTCCACCAGTTCTTCGGCGAGAACATGCTGCGTGCCGACGTGTGCAACGCGGTGGACGAGCTGGGCCAGCTGCTGGACC ACACCGGCCCGGTGGCGGCGTCCGAGCGCAACGCCGCGCGCATCTTCAGCGCCGACCACCTGTTCTTCGTCACCAACGGC ACCTCGACCTCGAACAAGATCGTCTGGCACTCCACCGTCGCCGCCGGCGACATCGTGCTGGTGGACCGCAACTGCCACAA GTCGAACCTGCACGCCATCATGATGACCGGGGCGATCCCGGTGTTCCTGATGCCGACGCGCAACCATTACGGCATCATCG GCCCGATTCCGAAGTCCGAATTCCAGCTCGACAATATCAAGAAAAAGATCCTGGCCAACCCGTTCGCGCGCGAGGCGCTG GAAAAGAACCCGGGCGCCAAGCCGCGCATCCTGACCATCACCCAGTCCACCTACGACGGCATCCTGTACAACGTCGAGGA GATCAAGAGCATGCTGGACGGCGAAGTCGACACCCTGCACTTCGATGAAGCCTGGCTGCCGCACGCGAGCTTCCACGACT TCTACGGCGACTTCCACGCCATCGGCGAGGGCCGTCCGCGCTGCAAGGACTCGATGATCTTCTCCACCCAGTCCACCCAC AAGCTGTTGGCCGGCATCTCGCAGGCCTCGCAGATCCTGGTGCAGGACCCGCAGAACCGTCAGCTCGACACCGCCTGGTT CAACGAAGCCTACCTGATGCACACCTCGACCAGCCCGCAGTACGCGATCATCGCCAGCTGCGACGTGGCGGCGGCGATGA TGGAGCAGCCGGGCGGCCAGGCACTGGTGGAGGAATCGCTGGTGGAGGCGCTGGACTTCCGCCGCGCCATGCGCAAGGTG GACGAGGAGTACGGCCACGACTGGTGGTTCAAGGTGTGGGGCCCGAACGAACTGTCCGACGACGGCATCTGCGACCCGGC CGACTGGGAACTGGAGCCGGACGAGCGCTGGCACGGCTTTGCCGGCATCGAGGAAGGCTTCAACCTGCTCGACCCGATCA AGGCCACCATACTCACCCCGGGCCTGGACGTGGACGGCAGCTTCGAAGAGATGGGCATCCCGGCCGCCATCGTCACCAAG TACCTGACCGAGCACGGCGTGGTGGTGGAGAAGACCGGCCTGTACAGCTTCTTCATCATGTTCACCATCGGCATCACCAA GGGCCGCTGGAACACGCTGATCTCGCTGCTGCAGCAGTTCAAGGACGATTTCGACAAGAACCAGCCGATGTGGCGCATCA TGCCGGAGTTCGTCGCCAAGTACCCGCAGTACGAGCGCGTCGGCCTGCGCGAGCTGTGCCAGCGCATTCACCAGCTGTAC AGCAAGCACGACATCGCGCGCCTGACCACCGAGATTTACCTGTCCGAGATGGAGCCGGCGATGCGTCCGGCCGACGCCTT CGCCAAGATGGCGCACCGCGAGATCGAGCGCGTGCCGGTAGAGGAACTGGAAGGCCGCGTCACCTCGGTGCTGCTGACGC CGTACCCGCCGGGCATCCCGCTGCTGATCCCGGGCGAGCGCTTCAACCGCACCATCGTCGACTACCTGCGCTTCGCCCAG GAGTTCAACGGCGAACTGCCGGGTTTCGAAACCGACGTGCACGGCCTGGTGGCGATGGAAAAGAACGGCAAGAAGGTGTA TTGCGTGGATTGCGTGAAGCAGTAA Protein sequence : MRFHFPIVIIDEDFRSENTSGSGIRELAAAMEKEGMEVVGYTSYGDLTSFAQQQSRAAGFILSIDDEEFGSGTPEEALDA LANLRNFVAEIRRRNPDIPLYLYGETRTARHIPNDILRELHGFIHMHEDTPEFVARHIIREAKSYLDTLAPPFFRALVHY AHDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHLFFVTNG TSTSNKIVWHSTVAAGDIVLVDRNCHKSNLHAIMMTGAIPVFLMPTRNHYGIIGPIPKSEFQLDNIKKKILANPFAREAL EKNPGAKPRILTITQSTYDGILYNVEEIKSMLDGEVDTLHFDEAWLPHASFHDFYGDFHAIGEGRPRCKDSMIFSTQSTH KLLAGISQASQILVQDPQNRQLDTAWFNEAYLMHTSTSPQYAIIASCDVAAAMMEQPGGQALVEESLVEALDFRRAMRKV DEEYGHDWWFKVWGPNELSDDGICDPADWELEPDERWHGFAGIEEGFNLLDPIKATILTPGLDVDGSFEEMGIPAAIVTK YLTEHGVVVEKTGLYSFFIMFTIGITKGRWNTLISLLQQFKDDFDKNQPMWRIMPEFVAKYPQYERVGLRELCQRIHQLY SKHDIARLTTEIYLSEMEPAMRPADAFAKMAHREIERVPVEELEGRVTSVLLTPYPPGIPLLIPGERFNRTIVDYLRFAQ EFNGELPGFETDVHGLVAMEKNGKKVYCVDCVKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 1e-105 | 42 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 2e-111 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NH8B_3567 | YP_004848732.1 | Orn/Lys/Arg decarboxylase | VFG1670 | Protein | 9e-106 | 42 |
