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Name : pilB (NH8B_3513) Accession : YP_004848679.1 Strain : Pseudogulbenkiania sp. NH8B Genome accession: NC_016002 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3684175 - 3685884 bp Length : 1710 bp Strand : - Note : - DNA sequence : ATGGAAGTTTCTGCCGGCGTTTCCGGCCTCGGCCGAGCCTTGGTGCAACATAACAGCCTGCTGCTGCAGGATGCCGAGGC TATTCAGCGCCAGGCGCAGAGTTCGTCGATCAGCTTCGTCGAGCAGCTTATTCTCAGCAAGAAAATGAGCTCGCTGGAGG TGGCGACGTTCGCTTCACAGGTGTTCGGCTTTCCCTTGCTGGACCTTGCCGCCATCGAGCCGGAGCAACTGCCGCAGGGG CTGGTGGACGAGGACCTGATCAGCTCGCGCCGCCTGTTGCCCTTGTACAAGCGGGGCAGCCGGCTGTTCATCGGCACCTC CGACCCCACCCAGACCTCGGCCTTCCACGCCATTACCTTCAAGACTAGCCTGTCGGTCGAAGTCGTGGTGGTGGAGGACG ACAAGCTCGGCAAGCTGATCGGCAGCTACCAGGCGGGTGGGGCCGAAGCGATCAAGGCCCTGGTGGACGAGGATTTTGGC GACCTTGAGTTTGCCGAGCCGGATGCCGAGCCGGAAAAGACCGTCGCCCAGACCGAAGTGGACGATGCCCCCGTGGTCAA GTTCATCCACAAGGTGCTGCTGGATGCGATCAACGGCGGGGCATCCGACGTCCATTTCGAGCCGTATGAGAAGTATTACC GCATCCGCTACCGGGTGGATGGCGTGCTCAAGGAAGTCGCCCAGCCGCCCCTCTTGCTGAAGGAAAAGATTGCTTCACGC ATCAAGGTGATCTCGCGGCTCGACATTTCGGAGAAGCGCGTGCCGCAGGACGGCCGCTTGAAGCTGGTGTTGTCCAAGAC GCGTGCCATCGATTTCCGGGTCAGCACTCTGCCGACGCTGTTTGGCGAGAAGATCGTGATGCGTATTCTCGACCAATCGG CGGCCACGCTGAATATCGAGCAGCTGGGGTTCGAGCCGGAACAGAAGGCGATGCTGCTCGAGGCCATCAGCCGCCCCTAT GGCATGGTGCTGGTGACCGGTCCGACCGGCAGCGGCAAGACGGTGTCGCTCTATACCTGCCTGAACATCTTGAACAAGCC GGACACCAATATTTCCACGGCGGAGGACCCGGTCGAAATCAACCTGCCGGGGATCAACCAGGTGAACGTCAACGAGCGCG CGGGGCTGACCTTTTCGTCGGCGCTGAAAGCCTTTTTGCGCCAGGATCCGGACGTGATCATGGTGGGTGAAATCCGCGAT TTTGAAACCGCCGACATCGCCATCAAGGCGGCACAGACCGGCCACATGGTCTTTTCCACGCTGCATACCAATAATGCTCC CGCCACGCTAACGCGCTTGCTGAACATGGGGGTAGCGCCGTTCAACGTCGCCAGTTCCGTGCTGCTGATCATGGCGCAGC GCCTGGCCAGACGCTTGTGTAACAATTGCAAGAAGCCGATGGATATTCCGAAAGAGGCGCTGTTACGGGCGGGCTACCGT GAGGTGGAGCTGGACGGCAGTTGGCAGCCTTACGGACCCGTCGGGTGCCGCGAGTGTCGCGATTCGGGCTACCGGGGGCG GGTGGGGATTTATGAGGTCATGCCCATCACCGATGCCATGACTCGTCTTATCATGAAAAACGGCACAGCGGTGGACATCG CGGATCTGGCTCGGCAGGAGGGGATGGTCGATCTGCGTCGTGCCGGCTTGCTCAAGGTGAAGCAGGGCATCACCTCGCTG GCGGAAATCGAAGCCGCCACCAACGAATAA Protein sequence : MEVSAGVSGLGRALVQHNSLLLQDAEAIQRQAQSSSISFVEQLILSKKMSSLEVATFASQVFGFPLLDLAAIEPEQLPQG LVDEDLISSRRLLPLYKRGSRLFIGTSDPTQTSAFHAITFKTSLSVEVVVVEDDKLGKLIGSYQAGGAEAIKALVDEDFG DLEFAEPDAEPEKTVAQTEVDDAPVVKFIHKVLLDAINGGASDVHFEPYEKYYRIRYRVDGVLKEVAQPPLLLKEKIASR IKVISRLDISEKRVPQDGRLKLVLSKTRAIDFRVSTLPTLFGEKIVMRILDQSAATLNIEQLGFEPEQKAMLLEAISRPY GMVLVTGPTGSGKTVSLYTCLNILNKPDTNISTAEDPVEINLPGINQVNVNERAGLTFSSALKAFLRQDPDVIMVGEIRD FETADIAIKAAQTGHMVFSTLHTNNAPATLTRLLNMGVAPFNVASSVLLIMAQRLARRLCNNCKKPMDIPKEALLRAGYR EVELDGSWQPYGPVGCRECRDSGYRGRVGIYEVMPITDAMTRLIMKNGTAVDIADLARQEGMVDLRRAGLLKVKQGITSL AEIEAATNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-83 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-83 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_004848679.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 1e-143 | 56 |
| pilB | YP_004848679.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 4e-151 | 56 |
| pilB | YP_004848679.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 7e-140 | 54 |
| pilB | YP_004848679.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 8e-84 | 46 |
| pilB | YP_004848679.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 1e-85 | 46 |
