|
Name : NH8B_3342 (NH8B_3342) Accession : YP_004848517.1 Strain : Pseudogulbenkiania sp. NH8B Genome accession: NC_016002 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 3515958 - 3516734 bp Length : 777 bp Strand : - Note : K00979 DNA sequence : ATGAACCGCGGCTTCACCGTGGTGGTTCCGGCACGCATGGCGTCGAGCCGGCTGCCCGGCAAGCCGCTGGCCGACATCGC CGGCAAGCCGATGGTGGTGCGGGTGGCCGAGCAGGCTGCCAGGTCGGCCGCGCGCGCGGTGATCGTCGCCACCGATCATC CGGATATCGTCACGGCGTGCACCGCTCACGGCGTACGCGCGGTGATGACCCGGGCAGACCATGCCAGCGGCACCGATCGC CTGGCCGAGGTCGCCGCCACGCTCAGCCTGGGCGCCGACGAGATCATCGTCAACGTGCAGGGCGACGAACCGCTGATCGA CCCGGCGCTGATCGATCGCCTGGCCGGCCTGATGGCCGAATCCGGCGTGCCGATGGCGACGCTGGCGCACCCCATCCACT GTGCCGCCGACGTGTTTAATCCCAACGTCGTGAAAGTGGTGCTTGACCGGACCGGCCGTGCTCTTTATTTTAGTCGGGCA CCCATCCCCTATGCCCGAGATGCGTTCGCTCAGGATGTGAACGTTTTGCCGCCCGAGCTACCGGTTCTGCGGCACATCGG CATGTACGCCTACCAGGCGGGTTTTCTCTCTACCTACACTTCGCTGACGCCCGCGCCGCTGGAAACGTTCGAGGCGCTGG AGCAGTTGCGCGTGCTGTGGCACGGCTACCCCATCATGGTGGCCACCGTCGCCGACGCGCCGCCAGCCGGAGTCGATACG CCAGATGATCTCGAGCGGGTGCGTGCTCTGTTCGCCACCCGCTCGAAAAACGATTAG Protein sequence : MNRGFTVVVPARMASSRLPGKPLADIAGKPMVVRVAEQAARSAARAVIVATDHPDIVTACTAHGVRAVMTRADHASGTDR LAEVAATLSLGADEIIVNVQGDEPLIDPALIDRLAGLMAESGVPMATLAHPIHCAADVFNPNVVKVVLDRTGRALYFSRA PIPYARDAFAQDVNVLPPELPVLRHIGMYAYQAGFLSTYTSLTPAPLETFEALEQLRVLWHGYPIMVATVADAPPAGVDT PDDLERVRALFATRSKND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 6e-35 | 46 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 4e-34 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 3e-34 | 46 |
