Gene Information

Name : NH8B_3250 (NH8B_3250)
Accession : YP_004848430.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3428448 - 3429164 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence :
ATGACGCCCGACGGCCGCCCCCTCGTCGAGCTGCGCCGGGTCACCAAGACCTACGGCCGCGGCGCGGCGGCGATGCAGGC
ACTGGGCGGGATCGACATCGTCATCGCCCAAGGCGAGTTCGTGGCGGTGATGGGGCCGTCCGGCTCGGGCAAGAGCACCT
GCATGAACCTGATCGGCTGTCTCGATACCCCGAGCTCCGGCAGCTACCTGTTCCAGGGGGTCGAGGTGGGCGGGCTCACG
CGCGACCAGCGCGCGCTGCTGCGGCGCCACTACCTGGGTTTCGTGTTCCAGGGCTTCAACCTGCTCAACCGCACCAGCGC
CCTGGAGAACATCGAGCTGCCGCTGATCTACCGCGGCGATCCCGCCGAACAGCGCCACCAGCGCGCCCGCGAGGCGCTGG
CCGAGGTGGGGCTGGCGGGCTGGGAGGACCACACCCCGGGCGAACTGTCCGGCGGGCAGCAGCAGCGCGTGGCGATCGCG
CGCGCCATCGTCACCCGTCCCGCGCTGCTGCTGGCGGACGAGCCGACCGGCAACCTCGACAGCGCGCGCAGCCAGGAGAT
CATGACCATCCTCACGCGCCTGAACCGGGAGCAGGGCATCACCATCGTGATGGTGACGCACGAACCGGACATGGCGGCGT
ACGCCGGCCGCACCATCCATTTTCGCGACGGCCTGGTGGTGCCGGCAGCGGAGCGCGCACACCAGGGAGGCGGGTGA

Protein sequence :
MTPDGRPLVELRRVTKTYGRGAAAMQALGGIDIVIAQGEFVAVMGPSGSGKSTCMNLIGCLDTPSSGSYLFQGVEVGGLT
RDQRALLRRHYLGFVFQGFNLLNRTSALENIELPLIYRGDPAEQRHQRAREALAEVGLAGWEDHTPGELSGGQQQRVAIA
RAIVTRPALLLADEPTGNLDSARSQEIMTILTRLNREQGITIVMVTHEPDMAAYAGRTIHFRDGLVVPAAERAHQGGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_3250 YP_004848430.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-53 52
NH8B_3250 YP_004848430.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-41 48
NH8B_3250 YP_004848430.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-39 44
NH8B_3250 YP_004848430.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-37 41