Gene Information

Name : radC (NH8B_3103)
Accession : YP_004848298.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Virulence
Product : DNA repair protein RadC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 3271503 - 3272177 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGATCTGCGACTGGCCTGCCGCGGAGCGGCCCCGGGAAAAGCTGCTGGCACAGGGGGCGGGGCGTCTTTCCGACGC
CGAATTGCTGGCCATTTTTCTGCGCACCGGCATCAAGGGGCTGTCGGCCGTCGACATGGCACGCCGGTTGATGACCGAAT
TCGGTTCGCTGTCGCGGCTCTTGTCGGCCAACCTGGCCGAGTTCGAGCGCCAGCCCGGCCTCGGCGTGGCCAAGTACACC
CAGCTGATGGCGACCAAGGAACTGGTGCGACGGGCGCTGGCCGAAGAGATGAAGCTGGCCGATGCGCTGTCGAGCCCGCA
GGCGGTGCGCGACTTTCTGCGGCTGAGCATCGGCCTGCGCGACGTCGAAGTGTTCGTGGTGATCTTCCTGACGGCACAAA
ACCGCGTTCTGGCGGTCGAAGAAGTATTTAGCGGCACCTTGAGCGAGACCCGGGTCTATCCGCGCGAGGTGGTGCGGCGG
GCGCTGGCGCACAACGCGGCCGGCGTCATCGTGGCGCACAACCACCCTTCCGGCGTCGCCGAGCCCTCGTCGGCCGACCG
GGCGCTGACCGATACCCTCAAGGCCGCGCTGCAACTGGTGGATGTCCGCTTGCTGGACCATTTCGTGATCACGGGAAGCC
ATGCCGAGTCGTTTGCCGAGCGTGGCTGGCTGTAG

Protein sequence : 
MSICDWPAAERPREKLLAQGAGRLSDAELLAIFLRTGIKGLSAVDMARRLMTEFGSLSRLLSANLAEFERQPGLGVAKYT
QLMATKELVRRALAEEMKLADALSSPQAVRDFLRLSIGLRDVEVFVVIFLTAQNRVLAVEEVFSGTLSETRVYPREVVRR
ALAHNAAGVIVAHNHPSGVAEPSSADRALTDTLKAALQLVDVRLLDHFVITGSHAESFAERGWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-26 41
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
radC YP_004848298.1 DNA repair protein RadC VFG1119 Protein 2e-26 41