Gene Information

Name : NH8B_2798 (NH8B_2798)
Accession : YP_004848005.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2957788 - 2958450 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAGTGCTGCTTGTCGAGGATGATCCCCTGCTTGGACAAGCCATCAGAGATCAGGTCTCGCACGACGGACATTCAAC
CGACTACGTCGGGAACCTCCGTGACGCCAGAAGCTACGTACAAGCCGCGAACTATGATTTGATCTTGTTGGATCTGTTGT
TGCCTGACGGCAGAGGAATCGATTTCCTTCGGGAACTGCGCACGCACGGCTCGACGGTTGCCGTCATTATCCTGACGGCG
CTCGATCAGGTTTCCAACCGCGTCGCGGGATTGAATGCCGGCGCCGATGACTATCTCGTCAAGCCGTTCGATCTGTCTGA
ACTCTCGGCGCGCGTAAACGCGGTTGCTCGCCGGTACAGCGGCAATCCGAATCCGCTCATCACGATGGGGGATCTTGAGA
TCGACCTAACCGCCCACCGTATTAGGCGCAATGGCCATACCATCTCGCTGACGGCTAGCGAATGGGCACTGCTTGAGGCA
TTCATCCATCGACAAGACATGATCCTCTCCAAGGCACAGTTAGAGCAGCGTCTTTATTCATTCGGCGATGAGATTGGCAG
CAATACAATCGAGGTGCACATGAGTCGGCTACGCAAGAAGTTGGGAGCCGACCTGATCGAAACGGTACGCGGCCTTGGCT
ACCGGCTGCGGCCTGCCCGATAA

Protein sequence : 
MRVLLVEDDPLLGQAIRDQVSHDGHSTDYVGNLRDARSYVQAANYDLILLDLLLPDGRGIDFLRELRTHGSTVAVIILTA
LDQVSNRVAGLNAGADDYLVKPFDLSELSARVNAVARRYSGNPNPLITMGDLEIDLTAHRIRRNGHTISLTASEWALLEA
FIHRQDMILSKAQLEQRLYSFGDEIGSNTIEVHMSRLRKKLGADLIETVRGLGYRLRPAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_2798 YP_004848005.1 DNA-binding response regulator BAC0083 Protein 2e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_2798 YP_004848005.1 DNA-binding response regulator VFG1389 Protein 2e-24 42