Gene Information

Name : NH8B_2538 (NH8B_2538)
Accession : YP_004847766.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2677430 - 2678881 bp
Length : 1452 bp
Strand : -
Note : K00135

DNA sequence :
ATGAAACTATTGAGCGAAGCGGAACTGCTGCAGGACCGCTGTTACATCGACGGGCAATGGCTGGACGGCGCCGAGCGCCT
GGCCGTGCACAATCCGGCCACCGGCGAGACCATCGGCAGCGTGCCGCGCCTGGGCGCGGCCGAAACCCGCCGCGCCATTG
ACGCGGCGCAGGCCGCCGGCGTGGCCTGGCGTGCGCTGAGCGGCAAGGAGCGGGCGGGCTATCTGCGCCGCTGGTTCGAC
CTGGTGCTGGCGCATACCGAGCCCTTGGCGCGGCTGCTGACCGCGGAAATGGGCAAGCCGTTGGCCGAAGCCAAGGGGGA
GATCGCCTACGGCGCGGCCTATATCGAGTGGTTTGCCGAGGAGGCCAAGCGCGTCTACGGCGATGTGATTCCCGCCACGC
AGGGCGACAAGCGCTTGATCACCATCAAGCAGCCGGTGGGTGTGGTCGCCGCGATCACGCCGTGGAACTTCCCAAATGCC
ATGCTGGCACGTAAGATCGCGCCGGCGCTCGCTGCGGGGTGCACCGTCGTCGCCAAGCCGGCGGAACAGACCCCGCTGTC
GGCGCTGGCCCTGGCCAGGTTGGCCGAAGAAGCCGGCATACCGCCCGGCGTGATCAACGTCGTTACCGGCGACCCGGTGG
CGATCGGCGGCGAGCTGACCAGCAACCCGCTGGTGCGCAAGCTGACCTTCACCGGTTCCACCGAGGTCGGACGGCTGCTG
CTGCGACAATGCGCCGGCACGGTGAAGAAGGTCAGCATGGAACTGGGGGGCAACGCGCCGTTCATCGTGTTCGACGACGC
CGACCTCGACGCCGCGGTGGAAGGCGCGATGGTGTCGAAGTACCGCAATAGCGGGCAGACCTGCGTGTGCGCCAACCGCC
TCTACGTGCAGGACGGGGTCTACGACGCGTTCATCGCCAAGCTGAGCGCACGCGTGGCCGCGCTCGACGTCGGCAACGGC
ATGGACGCCGGGGTGACGCAGGGGCCGCTCATCGATGACAAGGCCGTGGCCAAGGTCGAGGCGCACATCGCCGACGCGCT
GGAGCAGGGCGCGGCCATCGTCACCGGCGGCCGGCGCCATACGCTGGGTGGAACCTTCTTCGAGCCGACCATCCTGCGCG
ACGTGACGCCCGCGATGCGCGTGGCGAGCGAGGAAACCTTCGGCCCGGTGGCGCCGGTGTTCCGCTTCGTCGACGAGGCG
GACGTGATCGCCCAGGCCAACGCCAGCGAATTCGGCCTGGCGGCCTACTTCTACAGCCGCGATCTCGCCCGGGTATGGCG
CGTGGCCGAGGCGATCGAAGCGGGCATGGTGGGGGTCAACACCGGCCTCATTTCCACCGAAGTGGCGCCGTTCGGCGGGA
TCAAGCAATCCGGCTGCGGCCGGGAAGGATCGCGCTACGGCATCGAGGATTACCTCGAAATCAAATACCTCTGTCTTGGC
GGCATTCAATAA

Protein sequence :
MKLLSEAELLQDRCYIDGQWLDGAERLAVHNPATGETIGSVPRLGAAETRRAIDAAQAAGVAWRALSGKERAGYLRRWFD
LVLAHTEPLARLLTAEMGKPLAEAKGEIAYGAAYIEWFAEEAKRVYGDVIPATQGDKRLITIKQPVGVVAAITPWNFPNA
MLARKIAPALAAGCTVVAKPAEQTPLSALALARLAEEAGIPPGVINVVTGDPVAIGGELTSNPLVRKLTFTGSTEVGRLL
LRQCAGTVKKVSMELGGNAPFIVFDDADLDAAVEGAMVSKYRNSGQTCVCANRLYVQDGVYDAFIAKLSARVAALDVGNG
MDAGVTQGPLIDDKAVAKVEAHIADALEQGAAIVTGGRRHTLGGTFFEPTILRDVTPAMRVASEETFGPVAPVFRFVDEA
DVIAQANASEFGLAAYFYSRDLARVWRVAEAIEAGMVGVNTGLISTEVAPFGGIKQSGCGREGSRYGIEDYLEIKYLCLG
GIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-152 65
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 2e-82 41