Gene Information

Name : NH8B_2172 (NH8B_2172)
Accession : YP_004847401.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2269417 - 2270133 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACGGTGCTGCGCACGGAATCGCTCACGCGCGTGCTGCCGGGCGACGTGCCCACCACGCTGGTGGAGAACATCGA
TCTGGAGATCGCACGCGGCGAGTTCGTCGCCATCATGGGGCCGTCCGGCTCGGGCAAGTCGTCGCTGCTCTATCTCTTGG
GACTGCTCGACATGCCCACCGTTGGCCAGGTGTGGCTGGACGATACCCTGACCACCGGCCTGAGCGAAGACCACCTCGCC
CATATCCGGCTGGAACATATCGGTTTCGTGTTCCAGTTCCATTTCCTGCTGGAAGAATTCTCGGCGCTCGACAACGTGAT
GCTGCCGATGCGCAAACTGGCGCGCCTGCAAGAGGACGAGGCGCGCGACAAGGCGAGCGAGCTATTGCGCACCTTCGATC
TGGCCGAACAGATGCACAAGCGCCCGAGCCAGATGTCCGGCGGGCAGCGCCAACGCGTGGCCGTGGCGCGTGCGCTGGCG
AACGACCCGCAGCTGATCCTGGCGGACGAACCGAGCGGCTCGCTCGACACCCACGCCAGCGCCAACGTGCGCGACATCCT
GCACGACCTGGCGCGCAACCAGAACCGTGCCGTGGTCGCGGTCACGCACGACCCGACCTTCGCCCAGGCCGCCGACCGCC
GCATCTTTCTGGTGGATGGCCAGCTGCAACCGCCCGAGCGTGCCGCCGCGCTGTTCGAAGTGAGCGTGCGGCGCTAG

Protein sequence :
MSTVLRTESLTRVLPGDVPTTLVENIDLEIARGEFVAIMGPSGSGKSSLLYLLGLLDMPTVGQVWLDDTLTTGLSEDHLA
HIRLEHIGFVFQFHFLLEEFSALDNVMLPMRKLARLQEDEARDKASELLRTFDLAEQMHKRPSQMSGGQRQRVAVARALA
NDPQLILADEPSGSLDTHASANVRDILHDLARNQNRAVVAVTHDPTFAQAADRRIFLVDGQLQPPERAAALFEVSVRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-12 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-13 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-13 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-13 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_2172 YP_004847401.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-25 48
NH8B_2172 YP_004847401.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-22 45
NH8B_2172 YP_004847401.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-19 43