Gene Information

Name : NH8B_1990 (NH8B_1990)
Accession : YP_004847219.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 2079598 - 2080614 bp
Length : 1017 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTACGTTGAAGCTAGCGGCCTGGCCAAGAAATATGGCAACGCCACCATTTTCCAGGACATCCATTTCTCGCTACG
GAAAGGGGAATTCGTCACCCTGCTGGGCCCCAGCGGCTGCGGCAAATCCACGCTGCTGCGCAGCCTGGCCGGCCTGACCG
ACATCGACGCGGGCTGTATCCGCGTCGACGGCGAGGACATCACCCGCGCGGCGCCGCAAAAACGCGGCATCGGCATGGTG
TTCCAGAGCTATGCGCTGTTCCCCAACATGAGCGTGGAACAGAACATTGCCTTCGGCCTGAAGCTGCAAAAGCAGCCGGG
CAGCGAGATTGCGCGCAAGGTAGCCGACGTGATCCGCCTGGTGGCACTGGGCGGCAAGGAACAGCACTATCCGCACGAAC
TGTCCGGCGGACAGCGTCAGCGCGTGGCACTGGCGCGCGCGCTGGTGGTGGAGCCGCGCATCCTGCTGCTGGATGAACCC
CTGTCGGCGCTGGACGCCCGCATCCGCAAATCGCTGCGGGAGCAAATCCGCGACATCCAGCAACGACTGGGCCTGACCAC
GGTCTTTGTCACCCACGATCAGGAAGAAGCCCTGACCATGTCCGACCGCATCTTTGTCATGGATCAGGGGCGCATCGTGC
AGGAAGGCTCGGCCGAAATGATCTACACCCGCCCGGCCACCGAGTTCGTGGCGCGCTTCATGGGCAGCTACAACCTGCTG
ACACCCACCGAAGCCAGCCGCCTGCTGCAGCTGGAAACCCGCGGCCATCTGGCGATCCGCCCGGAAGCCATCCAGATCTT
CACCCCGGGGCAGGCCTACCCGGCGCACCTGAGCGCGCCGCTGCCGGCCACCATCCGCCAGCACCAGCTACTGGGCAACG
TCATCCGCTATCAGGTGCAGGCCCACGGCATCACCCTGCAGGTAGACCAGTTGAACCGCCGCGCCGAAGACCTGCTGGCC
GCCGGCACCGAGGTAAACCTGATGATCGATCAACAACAAATGCGGGAGGTGCACTGA

Protein sequence : 
MSYVEASGLAKKYGNATIFQDIHFSLRKGEFVTLLGPSGCGKSTLLRSLAGLTDIDAGCIRVDGEDITRAAPQKRGIGMV
FQSYALFPNMSVEQNIAFGLKLQKQPGSEIARKVADVIRLVALGGKEQHYPHELSGGQRQRVALARALVVEPRILLLDEP
LSALDARIRKSLREQIRDIQQRLGLTTVFVTHDQEEALTMSDRIFVMDQGRIVQEGSAEMIYTRPATEFVARFMGSYNLL
TPTEASRLLQLETRGHLAIRPEAIQIFTPGQAYPAHLSAPLPATIRQHQLLGNVIRYQVQAHGITLQVDQLNRRAEDLLA
AGTEVNLMIDQQQMREVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-38 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_1990 YP_004847219.1 ABC transporter ATP-binding protein BAC0604 Protein 9e-46 44