Gene Information

Name : NH8B_1936 (NH8B_1936)
Accession : YP_004847165.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2041527 - 2041703 bp
Length : 177 bp
Strand : -
Note : -

DNA sequence :
ATGCAACTGCTGACACTGAAGGAAGTCGAGAGCAAACTCGGCCTGAAGAAGACAAAAATCTACTTGATGATCGACAAAAA
CGAGTTCCCTCCCCCCATCAAAATTGGCGCGGCGTCGCGCTGGGCGGAGAACATAGTCGATGAGTGGATAGCCAACAGGC
TAAAGCAGCCATCATGA

Protein sequence :
MQLLTLKEVESKLGLKKTKIYLMIDKNEFPPPIKIGAASRWAENIVDEWIANRLKQPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 5e-07 51
unnamed CAA21398.1 - Not tested HPI Protein 6e-09 50
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 4e-09 50
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-06 43
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-06 43
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-06 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NH8B_1936 YP_004847165.1 phage transcriptional regulator AlpA VFG1118 Protein 9e-07 43