Gene Information

Name : thiC (NH8B_1623)
Accession : YP_004846854.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1707094 - 1709004 bp
Length : 1911 bp
Strand : -
Note : -

DNA sequence :
ATGAACGCGCCGACCAACCTGAATACCGAAATGGTGGTGGACCAAGCCGCCATCCAGCCGCTGCCCAACTCCCGCAAGAT
CTACGTCGAAGGCTCGCGCCCCGACCTCCGCGTGCCGATGCGCGAGATCAGCCAGGCCGACACCCCGACCCAGTTCGGCG
GCGAGCAGAACCCGCCGATCTACGTCTACGACTGTTCCGGCCCCTACACCGACCCGGCCGCCCAGATCGACATCCGCTCC
GGCCTGGCACCGATCCGCGCCGCCTGGATCGAGGAGCGCGGCGACACCGAGCAGCTGGCCGGTTTGAGCTCCGAGTACGG
CCGCGCCCGCGAGGCCGACGCCAAGCTCGACGAGCTGCGCTTCAACCTGACGCGCCAGCCGCGCCGCGCGCTGCCGGGCA
AGAACGTGACCCAGATGCACTACGCGCGCCAGGGCCTCATCACCCCGGAGATGGAATACATCGCCATCCGCGAGAACCAG
AACCGCGCCGCCTACCTCGAGTCGCTCAAGACCGCCGGCGGCAAGAACGCGCGCCTCGTCGAGCTGATGACGCGCCAGCA
CCCGGGCCAGAACTACGGCGCCGGCATGGTCGACACCATCACCCCGGAATTCGTGCGCCAGGAAGTGGCCGCCGGCCGCG
CCATCATCCCCAACAACATCAACCACCCGGAATCCGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGC
AACATCGGCAACTCGGCGGTGACCTCGTCGATCTCGGAAGAAGTGGACAAGATGACCTGGGGCATCCGCTGGGGTGCCGA
CACCATCATGGACCTGTCCACCGGCAAGAACATCCACGAGACGCGCGAGTGGATCCTGCGCAACTCGCCGGTGCCGATCG
GCACCGTGCCGATCTACCAGGCGCTGGAGAAGGTCAACGGCAAGGCCGAGGATCTGACCTGGGACATCTTCAAGGACACG
CTGATCGAGCAGGCGGAACAGGGCGTCGACTACTTCACCATCCACGCCGGCGTGCTGCTGCGCTACGTGCCGATGACTGC
CAACCGCATGACCGGCATCGTCAGCCGCGGCGGTTCGATCATGGCCAAGTGGTGTCTGGCGCATCACAAGGAGAACTTCC
TCTACACCCACTTCGAGGAAATCTGCGACATCATGAAGGCGTACGACGTGGCGTTCTCGCTGGGCGACGGCCTGCGTCCG
GGCAGTGTGTGGGACGCCAACGACGACGCGCAGCTGGGCGAGCTCAAGACCCTGGGCGAACTGACCCAGATCGCCTGGAA
GCACGACGTGCAGGTGATGATCGAAGGCCCGGGCCACGTGCCGATGCAGCTGATCAAGGAAAACATGGACAAGGAACTGG
AGTGGTGCCACGAGGCGCCGTTCTACACCCTGGGCCCGTTGACCACCGACATCGCCCCCGGCTACGACCACATCACCTCG
GCCATCGGCGCGGCCCAGATCGGCTGGTACGGCACCGCGATGCTGTGCTACGTCACGCCGAAGGAGCACCTCGGTCTGCC
GAACAAGGACGACGTCAAGGAAGGCATCATCACCTACAAGCTGGCCGCGCACGCCGCCGACCTGGCCAAGGGCCACCCGG
GCGCGCAGATCCGCGACAACGCGCTGTCCAAGGCGCGCTTCGAGTTCCGCTGGGAGGACCAGTTCAACCTCGGCCTCGAC
CCGGACCGCGCGCGTTCGTTCCACGACGAGACGCTGCCGAAGGATAGTGCCAAGGTGGCGCACTTCTGCTCGATGTGCGG
CCCGCACTTCTGTTCGATGAAGATCACCCAGGACGTGCGCGACTTTGCCGCGCAGCAGGGCTTGGCTGCAGAGGAGGCGC
TGGCCAAGGGCATGGAGGTGAAGTCGATCGAGTTCGTCAAGGGCGGCGCCAAGCTGTACGACAAGATCTGA

Protein sequence :
MNAPTNLNTEMVVDQAAIQPLPNSRKIYVEGSRPDLRVPMREISQADTPTQFGGEQNPPIYVYDCSGPYTDPAAQIDIRS
GLAPIRAAWIEERGDTEQLAGLSSEYGRAREADAKLDELRFNLTRQPRRALPGKNVTQMHYARQGLITPEMEYIAIRENQ
NRAAYLESLKTAGGKNARLVELMTRQHPGQNYGAGMVDTITPEFVRQEVAAGRAIIPNNINHPESEPMIIGRNFLVKING
NIGNSAVTSSISEEVDKMTWGIRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLTWDIFKDT
LIEQAEQGVDYFTIHAGVLLRYVPMTANRMTGIVSRGGSIMAKWCLAHHKENFLYTHFEEICDIMKAYDVAFSLGDGLRP
GSVWDANDDAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDKELEWCHEAPFYTLGPLTTDIAPGYDHITS
AIGAAQIGWYGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLD
PDRARSFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVRDFAAQQGLAAEEALAKGMEVKSIEFVKGGAKLYDKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 75
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 75
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73