Name : fliP (NH8B_1202) Accession : YP_004846442.1 Strain : Pseudogulbenkiania sp. NH8B Genome accession: NC_016002 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1227351 - 1228097 bp Length : 747 bp Strand : + Note : - DNA sequence : ATGAAACGTTTTCTTGTTTTCTCCGGCCTGCTGCTGGCAGGCCTGTTTCCGCTGCTGGCCGACGCTGCCGGTCTGCCGCT GATGAACAGCACGCCGGCCGCCGGCGGCGGGCAGAGCTATTCACTCAGCCTGCAGATGCTGCTGTTCATGACGGCACTGT CGTTCATTCCGGCCCTGCTGCTGATGATGACCTCGTTCACCCGCATCATCATCGTGCTGTCGTTGCTGCGCCAGGCCATG GGCACGATGCAGGCGCCGCCCAACCAGGTGCTGGTCGGGCTGGCGCTGTTTTTGACGCTGTTCGTGATGGGGCCGACCTT CGACCAGGTGTACAGCAAGGCCTGGGTGCCGTTCTCCGAGGACAAGATCGGCTTTGCCCAGATGCTGGAGGAGGGCAGCA AGCCGATGCGTGAGTTCATGCTGAAGCAGACGCGCGAGAAGGATCTGGCATTTTTCATCGAGGTATCGCAGTCGCCGGCG CCGCCCACCCCGGCCGAGGTGTCGATGAAGACCCTGATTCCGGCCTTCGTGATCAGCGAGCTGAAGACGGCGTTCCAGAT CGGCTTCATGGTCTTCATCCCGTTCCTGATCATCGACCTGGTGGTGGCCAGCATCCTGATGGCAATGGGGATGATGATGG TATCGCCGGTGATCATCTCCCTGCCGTTCAAGCTGATGCTGTTTGTGCTGGTGGACGGCTGGACCTTGCTGATGGGGTCG CTGGTACGGAGTTTCTACACCGGATGA Protein sequence : MKRFLVFSGLLLAGLFPLLADAAGLPLMNSTPAAGGGQSYSLSLQMLLFMTALSFIPALLLMMTSFTRIIIVLSLLRQAM GTMQAPPNQVLVGLALFLTLFVMGPTFDQVYSKAWVPFSEDKIGFAQMLEEGSKPMREFMLKQTREKDLAFFIEVSQSPA PPTPAEVSMKTLIPAFVISELKTAFQIGFMVFIPFLIIDLVVASILMAMGMMMVSPVIISLPFKLMLFVLVDGWTLLMGS LVRSFYTG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 4e-33 | 46 |
YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 4e-33 | 44 |
ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-33 | 43 |
ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-33 | 43 |
ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-33 | 43 |
hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 9e-30 | 43 |
hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 9e-30 | 43 |
hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 9e-30 | 43 |
hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 3e-32 | 43 |
XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-34 | 43 |
hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-34 | 43 |
hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-23 | 42 |
hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 1e-23 | 42 |
hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-33 | 42 |
yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 9e-33 | 42 |
yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-33 | 42 |
hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 1e-24 | 42 |
hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 1e-24 | 42 |
escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-31 | 42 |
escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-31 | 42 |
hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-33 | 41 |
hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 5e-34 | 41 |
hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 5e-34 | 41 |
hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-34 | 41 |
hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-33 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 1e-67 | 67 |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 3e-67 | 65 |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 9e-63 | 61 |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 4e-62 | 60 |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG0188 | Protein | 2e-35 | 45 |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 4e-32 | 44 |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG0519 | Protein | 1e-33 | 43 |
fliP | YP_004846442.1 | flagellar biosynthetic protein FliP | VFG0044 | Protein | 2e-33 | 43 |