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Name : lysS (FBFL15_0353) Accession : YP_004842722.1 Strain : Flavobacterium branchiophilum FL-15 Genome accession: NC_016001 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 407750 - 409441 bp Length : 1692 bp Strand : + Note : - DNA sequence : ATGCAATTATCAGAACAAGAAATCATTAGAAGAGACAAACTCAACGCTTTACGAAATTTAGGAATCAACCCTTATCCTGC CGATTTATTTCCGGTGGATCACACCTCAAAGCAGGTGAAGGAGCATTTTGAAGAAGGCAAAAAAGTGGTTTTGGCTGGTC GATTGATGAGTGTTCGTGACCAAGGAAAAGCGTCTTTTGCCGAGTTGCAAGACAGCGAAGGCCGCATCCAATTGTATGTA AACCGTGATGTGCTTTGTGAAGGCGACGACAAAACGCTCTACAACCAAGTATTTAAAAAATTAACCGATTTGGGTGATTT TGTGGGCATTGAAGGCACTTTGTTTACTACGCAAGTGGGTGCAAAATGTGTGCGAGTTTCGCAATTTACTTTTTTGAGCA AAACGCTTCGCCCATTACCCTTACCAAAAACAGATGACGAAGGTCGCGTTTTTGATGCCTTTACCGATCCCGAATTGCGC TATAGAATGCGTTATGTGGACTTGGTGGTGAACCCTCAAGTGAAAGAAGTGTTTGTAAAAAGAACCAAATTGTTTGCTGC CATGCGAACATTTTTCAACCAAGCGGGCTATATGGAGGTTGAAACTCCCGTGTTGCAATCCATTCCGGGTGGGGCTGCGG CACGTCCGTTTATTACACACCACAATAGTTTGGATATTCCGTTATACATGCGAATTGCCAACGAATTGTATTTGAAACGA TTAATCGTTGGTGGTTTTGATGGTGTTTATGAATTCTCAAAAAACTTCCGTAATGAAGGGATGGACAGAACGCACAACCC AGAATTTACAGCTATGGAAATCTATGTAGCCTACAAAGACTACAACTGGATGATGAACATGACCGAAAACTTGCTAGAAT ATTGTGCCATGCAAGTAAATGGCACAACCCAAGCTACTTTTGGCGAGCATCAAGTAGATTTTAAAGCACCTTATGCCCGA GTTACGATGACCGATGCCATCAAACAATTTACAGGTTTTGATATTACAGGTAAAACAGAGGAGGAATTGCGTGAAGCCGC AAAATCTATGGGAATTGAAGTGAATGAAACCATGGGAAAAGGCAAATTAATAGATGAAATTTTTGGCGAAAAATGCGAAG GCAACTTCATTCAGCCCACATTTATAACTGATTATCCGAAAGAAATGTCGCCATTGTGCAAATCGCACCGCGACAATCCA GATTTAACCGAGCGTTTTGAGTTGATGGTTTGCGGAAAAGAAATCGCAAATGCCTATTCCGAATTGAACGACCCAATAGA CCAACGTGAACGTTTTGAAGCACAAATGGCATTGGCAGAAAAAGGCGATGATGAAGCCAATGGTATCATTGACGAAGACT TTTTAAGAGCATTAGAATACGGAATGCCACCAACTTCTGGATTAGGAATTGGTATGGATAGATTGATTATGTTTTTAACC AATAATCCGAGTATTCAAGAAGTGTTGTTTTTCCCTCAAATGCGACCAGAGAAAAAAGGTCCTGAATTGACCGAAGACGA AAAACACATTATCGATATTTTGAAAGCAAACGAAGGAATTTCTATTGGCGAACTCAAAGAAAAAGCCGCTTTGAGTGGCA AAAAATGGGATGCAGCCAGCAAAGGCATCGCAAAACACGGCTTGATGAAAGTGGTAGGCGAACAAAAAGTTGTGGAATAT TTGGGGAAATAA Protein sequence : MQLSEQEIIRRDKLNALRNLGINPYPADLFPVDHTSKQVKEHFEEGKKVVLAGRLMSVRDQGKASFAELQDSEGRIQLYV NRDVLCEGDDKTLYNQVFKKLTDLGDFVGIEGTLFTTQVGAKCVRVSQFTFLSKTLRPLPLPKTDDEGRVFDAFTDPELR YRMRYVDLVVNPQVKEVFVKRTKLFAAMRTFFNQAGYMEVETPVLQSIPGGAAARPFITHHNSLDIPLYMRIANELYLKR LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMNMTENLLEYCAMQVNGTTQATFGEHQVDFKAPYAR VTMTDAIKQFTGFDITGKTEEELREAAKSMGIEVNETMGKGKLIDEIFGEKCEGNFIQPTFITDYPKEMSPLCKSHRDNP DLTERFELMVCGKEIANAYSELNDPIDQRERFEAQMALAEKGDDEANGIIDEDFLRALEYGMPPTSGLGIGMDRLIMFLT NNPSIQEVLFFPQMRPEKKGPELTEDEKHIIDILKANEGISIGELKEKAALSGKKWDAASKGIAKHGLMKVVGEQKVVEY LGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-99 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004842722.1 | lysine--tRNA ligase | VFG1668 | Protein | 2e-99 | 45 |
