Gene Information

Name : FBFL15_2462 (FBFL15_2462)
Accession : YP_004844704.1
Strain : Flavobacterium branchiophilum FL-15
Genome accession: NC_016001
Putative virulence/resistance : Virulence
Product : two component system response regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2892675 - 2893361 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGAATAATAAATTTTCGATTTTAGTAATAGATGATGAAATTCAAATAAGAAAATTATTAGAAATTTCATTAGAAGCAAA
TGATTATAAAGTTGAATTTGCAAGTAACGGAACTGAGGGATTAACTTTGGTAGCAAAAATTCAACCCGATTTAGTTTTGT
TAGACTTGGGTTTACCAGATGAAGATGGTCAAAATATCCTAATAAAATTAAGAGAATGGTATTTTAATCCAATAATTATT
CTGTCAGTTAAAAGTTCCGAAGTTGAAATAGTAAAAGCCCTAGACAACGGCGCAAATGATTATTTGACAAAACCATTTCG
AACCCAAGAATTATTAGCTCGAATGAGAACAGCTTTACGAGTAAATGCAGTTCAAAATACAGAGCCAATTGCTTCATTTG
GAAATGTTTCTATTGATTTAGTATCTCGAGTAGTGAAGGTTAATAATGAAATTTTAAAACTTACAGCTACTGAATATACA
CTCCTTATTTTATTATTCAAAAATGATGGTAGAGTTTTAACACATCAATATATTTTAAAAGAAATTTGGGGAAATAGTTA
TTCTGATCAAACCCAGTATTTGCGAGTTTTTGTAGCTCAATTGCGAAAAAAAATCGAAAAAGACCCAAACCGACCAAAAT
ATATAGTTACAGAGTCGGGTGTTGGTTATCGATTCAATACCAGTTAA

Protein sequence :
MNNKFSILVIDDEIQIRKLLEISLEANDYKVEFASNGTEGLTLVAKIQPDLVLLDLGLPDEDGQNILIKLREWYFNPIII
LSVKSSEVEIVKALDNGANDYLTKPFRTQELLARMRTALRVNAVQNTEPIASFGNVSIDLVSRVVKVNNEILKLTATEYT
LLILLFKNDGRVLTHQYILKEIWGNSYSDQTQYLRVFVAQLRKKIEKDPNRPKYIVTESGVGYRFNTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 8e-32 45
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 6e-32 45
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 2e-22 43
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 3e-22 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 3e-22 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 2e-22 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 3e-22 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 3e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FBFL15_2462 YP_004844704.1 two component system response regulatory protein VFG1390 Protein 6e-28 42