Gene Information

Name : tpx (FBFL15_1807)
Accession : YP_004844100.1
Strain : Flavobacterium branchiophilum FL-15
Genome accession: NC_016001
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 2133429 - 2133926 bp
Length : 498 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTACAATTACACTTGGAGGAAATCTTATTAATACAAATGGCAATTTGCCAACAGTAGGTTCAAAAGCAATTGATTT
TAAACTAATTAGCAATGATTTATCAGAGGTAAGTTTGTCTAATTTTGAAGGTCAAAAACTGGTTTTAAATATCTTTCCTA
GTATCGATACGGGAACTTGTGCCACATCAGTTAGAAAATTTAATGCACAAGCCAGTCAATTGGAAAATACAAAAGTATTG
TGTATTTCTAGAGATTTGCCTTTTGCCCAAAAACGTTTTTGTGGTGCAGAGGGGTTAGAAAACGTGCACAATTTATCTGA
TTTTAAAAATGGTGATTTTGGAAAAAATTATGGTTTAGAAATTGTAGATGGTCCATTAGCAGGATTACATTCCAGAGTAG
TAATTGTTATAGACGAAAAAGGAACAATTGTATATACAGAACAAGTTTCAGAAATAGCAAATGAACCCAATTATGAAGCT
GCTTTAAAAGTACTTTAA

Protein sequence : 
MATITLGGNLINTNGNLPTVGSKAIDFKLISNDLSEVSLSNFEGQKLVLNIFPSIDTGTCATSVRKFNAQASQLENTKVL
CISRDLPFAQKRFCGAEGLENVHNLSDFKNGDFGKNYGLEIVDGPLAGLHSRVVIVIDEKGTIVYTEQVSEIANEPNYEA
ALKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-28 43
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-28 43
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-27 42
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 9e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_004844100.1 thiol peroxidase VFG0087 Protein 2e-28 43