Gene Information

Name : FBFL15_1794 (FBFL15_1794)
Accession : YP_004844088.1
Strain : Flavobacterium branchiophilum FL-15
Genome accession: NC_016001
Putative virulence/resistance : Virulence
Product : putative type I restriction endonuclease
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : 3.1.21.3
Position : 2115740 - 2118778 bp
Length : 3039 bp
Strand : -
Note : -

DNA sequence :
ATGCCTACCCAAACCAACGAAGCCGCTCTAGAAGCCACCATACAAAAAAAACTCACAGGTACTTGTCTTGAAGAATTAAA
AAGCGATAGTTCAAATACCGTTAATGAGCGAGTAGAACTATACCGCTCTGGCAAAGGCTATTACATAGGGTTTGCCAATG
ATTTCAATGCAAAATATGCCATTGATGAAGTGCGTTTTTGGCATTTTTTAGAAACCACTCAAAAAGAAGAACTGGCTAAA
ATCCAAAAACAAAACGACTGGAAACTCAAAATTCTAGACCGTTTGGATAGAATGATCAAAAAGTATGGTATTTTGCGTTT
ACTACGTAAAGGTTTGGAGGTTGATGATGCTCATTTTACATTGATGTATGTTTTGCCATTAGCAAGTAGCAGTGCAGCAG
CAAAAACAAATTTTGAAAATAATGAGTTCAGCGTATCCAGACAAATTAGGTATTCATTGCTAAATCCTCGTGAAGAAATA
GATATGGTTGTTTTTGTAAATGGTTTGCCTATTGCAACTATGGAACTCAAAAACCATTGGACTGGGCAAAATGCCAAATT
GCATGGTCAAAATCAATACAAAACCAAAAGAGATATTACCCAACCCTTATTAAACTTTGGGCGTTGTATAGTGCATTTTG
CAGTAGATACTGACGAAGTTTACATGACAACCAAGCTAGACGGTGCAAATACTTTTTTCTTGCCATTCAATTTAGGACAC
AATTATGGTAAAGGCAATCCGCCCAATCCATTTGGTCACAAAACGGCTTACTTATGGGATGAGGTTTTAACACGTGAAAG
TTTGGCAAATATCATTCAGCATTTTGTTCGTTTTGACGGTAAAGAAACCGATGTTTTGAGCAAAAAGAATTTGTTTTTTC
CACGTTACCATCAAATGAATGTCGTGCGAAAACTAATTGCCCATGCCAGCAAAAATGGCGTTGGACAAACCTATTTAATT
CAACATTCTGCGGGTTCTGGTAAATCAAATTCCATTACTTGGGCAGCCTACCAATTGATAGAAACCTATCCAGAAAGTGA
AACCACACCAGGAAGCAGAGGTGTAAATAATCCGCTATTTGATTCTGTTATTGTGGTTACTGATAGACGACTTTTAGACA
AGCAACTTAGAGAAAATATCAAAGAATTTTCTGAAGTAAAAAACATAGTCGCTCCAGCTTATTCTTCCAAAGAACTCAAA
GAAAATTTAGAAAGCGGGAAACGTATTATTATCACCACCATTCAAAAATTCCCATTTATTGTAGATGGAATTGCCGATTT
AAGCGACAAACGTTTTGCAGTAATCATAGACGAAGCACACAGCAGTCAAAGTGGTTCTGCTGCCGATAATATGAACCGTG
CTATGGGGAGTAATAGTTCAGAAGAAGACGAAGAAGACCCACAAGATAAGATTTTGGAAATTATGCGTTCACGCAAAATG
AGTAAGAATGCCTCTTATTTAGCATTTACAGCAACACCAAAATCAAATACATTAGAGAAATTTGGGGAGTTACAAGAAGA
TGGAAAATTCAAACCGTTCCATTTGTATTCCATGAAACAAGCCATTGAGGAAGGTTTTATTCTTGATGTTTTGGCAAACT
ATACTACCTACAAAAGTTATTATGAAATTGAAAAATCAATAGAAGAAAATCCTTTGTTTGACACGAATAAAGCCCAAAAA
AAGCTTCGTGCTTTTGTGGAACAACATAAACAAACTATTGCCATTAAAGCAGATATAGTGGTCGATCATTTTATTACTAA
GATTGTCAATACTAAAAAGTTAAAAGGCAAGGCAAAAGCCATGATGGTTACACAAAGTATTGAATCGGCTATAAAGTATT
TCTTTGCTATACAAAAAATACTCCAAGAAAAAGGAACACCTTTCAAAGCAGTAATTGCTTTTTCTGGAAAGAAAAAAATA
GATGGTATCGAATATACGGAAGACAGTATCAATGGTTTTGCAGAAAAAGACACCAGAGATAAGTTTGATAGCGACGATTA
TAAAATATTAGTTGTGGCTAACAAATATCTCACTGGTTTTGACCAACCCAAATTAACAGCCATGTATGTGGATAAAAAGT
TGCAAGGTGTTTTAGCCGTGCAAGCCTTATCCAGACTAAACCGTGCAGCCAATAAATTAGGGAAGAAAACAGAAGATTTA
TTTGTATTGGACTTCTTTAATTCTACGGAAGATATGAAAGATGCATTTGACCCATTTTATACTGCCACTTCACTAAACAA
AGCTACAGATGTAAATGTTTTACACGAAATAAAAGCCATTTTAGACGATGTTGGTGTTTACGAATGGTCGGAAGTAGAAG
ATTTTGTAGATAAATATTTCAAAAAAGTAGATGCACAACTCCTAAGTCCAATCATTGATATAGCCGCTGATCGATTCAAT
TTTCAATTAGAATTAGAAGACAGCGAAAAAGCCGATTTCAAAATCAAAGCCAAACAATTTGTTAAGATTTATGGTCAAAT
GGCTTCGATATTGCCTTATGAAATAGTAAATTGGGAAAAGCTATTTTGGTTTTTAAAATTTTTAATTCCAAAATTGATTA
TAGTTGATGGTAATATTGATGCTTTAGATGAACTATTAAATTCAGTAGATTTGTCAACGTATGGTTTAGAAAGAGTAAAA
CTAAATTCCAGCATTGGTTTAGATGATTCCGAAACAGAATTGGATCCACAAAATCCAAATCCAAGAGGAGCACACGGTAC
TGACAAAGAAGAAGATCCTTTGGATTTAATTATCAATAGTTTTAATGAACGATGGTTTCAAGGTTGGGAAGCAACGCCAG
AAGAACAAAGAGTAAAATTTGTTACATTAGCCAAAAGCATAAAAGCTCATCCCGATTATTTAGAAAAATATTCTGAAAAT
ACTGATGTTCAAAACAGAGAAATTGCATTTAGAAAAATATTCGATGAGGTTATGGCACAACAACGAAAAATAGAACTCGA
TTTATACAAAAAAGTAACCCAAGACGATTCTTTTAGAATTGCGATGCAAGATACTTTGAAAAGGATTTTGAGTGCTTAG

Protein sequence :
MPTQTNEAALEATIQKKLTGTCLEELKSDSSNTVNERVELYRSGKGYYIGFANDFNAKYAIDEVRFWHFLETTQKEELAK
IQKQNDWKLKILDRLDRMIKKYGILRLLRKGLEVDDAHFTLMYVLPLASSSAAAKTNFENNEFSVSRQIRYSLLNPREEI
DMVVFVNGLPIATMELKNHWTGQNAKLHGQNQYKTKRDITQPLLNFGRCIVHFAVDTDEVYMTTKLDGANTFFLPFNLGH
NYGKGNPPNPFGHKTAYLWDEVLTRESLANIIQHFVRFDGKETDVLSKKNLFFPRYHQMNVVRKLIAHASKNGVGQTYLI
QHSAGSGKSNSITWAAYQLIETYPESETTPGSRGVNNPLFDSVIVVTDRRLLDKQLRENIKEFSEVKNIVAPAYSSKELK
ENLESGKRIIITTIQKFPFIVDGIADLSDKRFAVIIDEAHSSQSGSAADNMNRAMGSNSSEEDEEDPQDKILEIMRSRKM
SKNASYLAFTATPKSNTLEKFGELQEDGKFKPFHLYSMKQAIEEGFILDVLANYTTYKSYYEIEKSIEENPLFDTNKAQK
KLRAFVEQHKQTIAIKADIVVDHFITKIVNTKKLKGKAKAMMVTQSIESAIKYFFAIQKILQEKGTPFKAVIAFSGKKKI
DGIEYTEDSINGFAEKDTRDKFDSDDYKILVVANKYLTGFDQPKLTAMYVDKKLQGVLAVQALSRLNRAANKLGKKTEDL
FVLDFFNSTEDMKDAFDPFYTATSLNKATDVNVLHEIKAILDDVGVYEWSEVEDFVDKYFKKVDAQLLSPIIDIAADRFN
FQLELEDSEKADFKIKAKQFVKIYGQMASILPYEIVNWEKLFWFLKFLIPKLIIVDGNIDALDELLNSVDLSTYGLERVK
LNSSIGLDDSETELDPQNPNPRGAHGTDKEEDPLDLIINSFNERWFQGWEATPEEQRVKFVTLAKSIKAHPDYLEKYSEN
TDVQNREIAFRKIFDEVMAQQRKIELDLYKKVTQDDSFRIAMQDTLKRILSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 66
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 66
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FBFL15_1794 YP_004844088.1 putative type I restriction endonuclease VFG1098 Protein 0.0 66