Gene Information

Name : kdsB (FBFL15_1358)
Accession : YP_004843670.1
Strain : Flavobacterium branchiophilum FL-15
Genome accession: NC_016001
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 1592360 - 1593106 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATTATAGCTGTTATTCCTGCTCGATATGCTTCTACACGTTTTCCTGCAAAATTAATGCAGGATTTAGGAGGCAA
AACCGTTATAGCCCGAACTTATCAAGCGGCTGTCGATACTCAATTATTTGATGCTGTATTTGTGGTAACGGATTCTGAAT
TAATTTTTCAAGAAATTGAAATGCAAGGTGGCAAAGCCATTATGAGTCATAAAACACATGAATCGGGTTCAGACAGAATT
GCTGAAGCCGTAGCCCATTTGGATGTGGATATTGTCATAAATGTTCAGGGAGATGAACCTTTTATAAGCAAACAGCCACT
TGTGGATTTGATTGAAGCTTTTAAAAATGATAAGAAAAATGAAATTGATTTGGCTTCTTTAATGAGAATTATCGATAACG
AAGAGGAGATACAAAATCCTAATCATGTCAAAGTGGTAGTAGATCAAAACAATTTTGCATTGTATTTTTCTAGATCGGTA
ATTCCTTATCCAAGAGAAAAAAATGTAGGTGTTACCTATTTTCAACACATTGGTATTTATGCTTTTCGAAAACAAGCCTT
GTTAGATTTTTATCAATTGCCTATGATGTCATTAGAAGCTTCAGAAAAATTAGAGCAATTACGGTATCTTGAATTTGGTA
AAAAAATTAAAATGATTACTACAAATCAAGTTAGCATAGGTATTGATACCGAAGAAGATTTAGATAAAGCAAGAAAATAT
TTGAAATACAATATAAATTCAATGTAA

Protein sequence :
MKIIAVIPARYASTRFPAKLMQDLGGKTVIARTYQAAVDTQLFDAVFVVTDSELIFQEIEMQGGKAIMSHKTHESGSDRI
AEAVAHLDVDIVINVQGDEPFISKQPLVDLIEAFKNDKKNEIDLASLMRIIDNEEEIQNPNHVKVVVDQNNFALYFSRSV
IPYPREKNVGVTYFQHIGIYAFRKQALLDFYQLPMMSLEASEKLEQLRYLEFGKKIKMITTNQVSIGIDTEEDLDKARKY
LKYNINSM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-40 41
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 3e-40 41
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-40 41