|
Name : smpB (LSA_05330) Accession : YP_004840904.1 Strain : Lactobacillus sanfranciscensis TMW 1.1304 Genome accession: NC_015978 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 524027 - 524500 bp Length : 474 bp Strand : + Note : - DNA sequence : ATGGTCAAAAAGAAGAGTAAGCCAAATAACGATAATGTAATGGCTACCAATCGAAAGGCTCGTCATGATTATTTTATTGA AGAGACTTTTGAGGCAGGAATTGCATTAACCGGGACCGAAATAAAATCTGTAAGAGAACGTCGGGTTACTTTGAAAGATG GATTCGTTTCTTTTAGAAATGGAGAAGCCTTTCTTCAAAATATTCATATTAATGAATATACTGAAGGCAACCAATTTAAT CATGATCCATTACGCAATCGGAAGTTGCTCTTGCATAAGAAAGAAATTAGAAAGCTTTCTGATGCAGTTCAAACTAAAGG TGTAACCGTGGTACCACTAAAAATGTACTTGAAACATAATTTTGCAAAAGTACTAATTGGTGTTGCTAAAGGTAAACATG AATATGACAAACGTCACGACATTAAAGCTCGTGATCAAAAACGTCAAATTGATCGAGTAATGAAACATTATTAA Protein sequence : MVKKKSKPNNDNVMATNRKARHDYFIEETFEAGIALTGTEIKSVRERRVTLKDGFVSFRNGEAFLQNIHINEYTEGNQFN HDPLRNRKLLLHKKEIRKLSDAVQTKGVTVVPLKMYLKHNFAKVLIGVAKGKHEYDKRHDIKARDQKRQIDRVMKHY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 3e-39 | 60 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-30 | 45 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 4e-27 | 41 |
