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Name : serS2 (LSA_11530) Accession : YP_004841470.1 Strain : Lactobacillus sanfranciscensis TMW 1.1304 Genome accession: NC_015978 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase 2 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1114817 - 1116106 bp Length : 1290 bp Strand : - Note : - DNA sequence : ATGCTAGATATGAAAATGATTCGACAAAATGCTGAATGGTTCAAACAAAAAATGGCTGATCGTGGAGTTGATGGTGCAAG CGTTGATCATTTAATGGAATTAGACCAAAAACGGCGTGATTTAATTGTGAAGAGTGAAGCACTTAAAGCTGAAAGAAATG AAGTTTCAGAAGAAATTTCACAACTTAAACGCAATAAAGAGAATGCTGATGCACAAATTAAGCGGATGCGTGAAGTTGGA GCCGAAATCAAACAACTTGATGCTGATTTAGAAACTACTAAGGCTGAACAAGATAACTTGGAAGCCCATCTTCCTAATAT CCCTAATGATAAAGTTCCTGTTAGTTTAACTGAAGAAGGTTCAGTTGAACTTCGCAAAGTCGGAACTCCACGTAAGTTTG ATTTTGAACCAAAGCCTCATTGGAAAATTGGAGAAAAACTTGATATTTTAGATTTCAAACGCAGTGCAAAAGTTGCTGGA AGTCGTTTTGTCTACTATATTGGTGCTGGATCAATGCTTGAAAGAGCCGTTTATAACTTCTATTTAGATGAAAATGATAA GGCCGGTTATACTGAAATTTTGCCACCTTACATGGTTAACTCGGCTTCAATGTTTGGAACTGGTCAATTCCCTAAATTTA AAGAAAATAAAGCTGGTTTTGAAATTGCAGATAGTGATTTAACGATGATTCCAACTGCCGAAGTACCTTTGGTTAACTTT TATCGTGATGAAGTAATTCCTGCTGAAAAACTTCCCGTTAAGTTTACAGCTTTAACTCCAGCCTTTCGTTCTGAAGCTGG TAGTGCCGGACGTGATACCAAGGGATTAATTCGTCTTCACCAATTTAATAAGGTTGAAATGGTTCAATTTACGAAACCAG AACAATCATGGGATGCTCTAGAAAATATTACTGCTCAAGCTGAATCGTCATTAAAGAAGCTAGGAATTCCTTATCACGTA ATTACTTTAACTAGTAGCGATATGAGTTTTACAGCTGCGATGACTCATGATATTGAAGTTTGGATGCCATCACAACACTG TTATCGTGAAATTTCAAGTTGTTCTAACACCACTGATTTTCAAGCTCGTCGTTCTCACATTCAATATCGTGACGAAAATG GTAAGTTGCAATATGTCCACACCTTAAATGGTTCTGGGCTTGCAGTTGGTAGAACTGTGGCTGCAATTTTGGAAAACTTC CAAAATGAAGATGGTACAGTTAATATTCCAGAAGTCCTACAACCATACATGCACGGTAAAACTAAGATTACTAAACAAGA TTTATTTTAA Protein sequence : MLDMKMIRQNAEWFKQKMADRGVDGASVDHLMELDQKRRDLIVKSEALKAERNEVSEEISQLKRNKENADAQIKRMREVG AEIKQLDADLETTKAEQDNLEAHLPNIPNDKVPVSLTEEGSVELRKVGTPRKFDFEPKPHWKIGEKLDILDFKRSAKVAG SRFVYYIGAGSMLERAVYNFYLDENDKAGYTEILPPYMVNSASMFGTGQFPKFKENKAGFEIADSDLTMIPTAEVPLVNF YRDEVIPAEKLPVKFTALTPAFRSEAGSAGRDTKGLIRLHQFNKVEMVQFTKPEQSWDALENITAQAESSLKKLGIPYHV ITLTSSDMSFTAAMTHDIEVWMPSQHCYREISSCSNTTDFQARRSHIQYRDENGKLQYVHTLNGSGLAVGRTVAAILENF QNEDGTVNIPEVLQPYMHGKTKITKQDLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-130 | 61 |
