Gene Information

Name : csbB (LSA_10570)
Accession : YP_004841385.1
Strain : Lactobacillus sanfranciscensis TMW 1.1304
Genome accession: NC_015978
Putative virulence/resistance : Virulence
Product : glycosyltransferase csbB
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1035301 - 1036239 bp
Length : 939 bp
Strand : +
Note : -

DNA sequence : 
TTGGAAACTATTAGTTTAGTTGTCCCTTGTTATAACGAACAGGAATCAATTACTTTATTTTATGATACCGTCGAAAAAGT
TTTTGCGGGAATGAATAAAGATTCAAAAAAGTACGTTCCTGATTATATTTTCATCAACGATGGATCATCAGATAATACTT
TAAAAATTTTAAACGAATTGCATAATCAACATCCTGAAACAGTCCACTTTATTTCTTTTTCTCGTAATTTTGGAAAAGAA
TCTGCCATTACTGCTGGATTAAGATCAGCTAATGGAGATTACATTGCTTTAATGGATGTCGATCTTCAAGATCCGCCTGA
ATTATTACCGAAAATGTTAAAAATTATTACAACTGAAGACTACGATTGCGTTGGTTGTATTCAAACTAGTCGAAAACAAA
ACCCAATTCGGGCGTTCTTATCATCCACTTTTTATCATGTAATTGATCGTTTATCAGATGTTAAAATCAAACCAAACGTA
CGTGATTATCGTTTAATGACACGTCAATATGTTGATGCCGTAAATGATTTAACTGAATATAATCGCTTTTCTAAAGGAAT
TTTCAGTTGGGTAGGTTTTAACACGAAGTACATTAAATACGCCGGACGTGAAAGAGCAGCTGGGGAAACCCACTGGTCAA
TGATTCAATTACTTGAATATTCAATTGAGGGAATTATTGATTTTTCTGATGCTCCTTTAAAAGTAGCAACTTGGGTCGGT
GGATTATCTTGTTTCTTTGCTGTTTTAGGTATCATTTTTACTGTAATTAGAACAATTTGTTTTGGTGGCTCAGTTGCTGG
CTGGCCTTCACTAGTTTCTATCATGTTATTAATTGGTGGAATTCAGCTTTTCTGTTTAGGAATTTTAGGTAAATACATTG
GTAAAATATACCTAGAAACTAAGCACCGCCCCCAATACATCATTAAGGAGCAAAAATAA

Protein sequence : 
METISLVVPCYNEQESITLFYDTVEKVFAGMNKDSKKYVPDYIFINDGSSDNTLKILNELHNQHPETVHFISFSRNFGKE
SAITAGLRSANGDYIALMDVDLQDPPELLPKMLKIITTEDYDCVGCIQTSRKQNPIRAFLSSTFYHVIDRLSDVKIKPNV
RDYRLMTRQYVDAVNDLTEYNRFSKGIFSWVGFNTKYIKYAGRERAAGETHWSMIQLLEYSIEGIIDFSDAPLKVATWVG
GLSCFFAVLGIIFTVIRTICFGGSVAGWPSLVSIMLLIGGIQLFCLGILGKYIGKIYLETKHRPQYIIKEQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 5e-45 42
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csbB YP_004841385.1 glycosyltransferase csbB VFG0670 Protein 9e-45 42