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Name : clpE (LSA_10410) Accession : YP_004841371.1 Strain : Lactobacillus sanfranciscensis TMW 1.1304 Genome accession: NC_015978 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit clpE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1018396 - 1020417 bp Length : 2022 bp Strand : + Note : - DNA sequence : ATGAAGGAGGTTTTGAATATGGAAGGACAACAAGGAGCTTATGGTTTCAGTAATTTAGATGATTTACTACGCTCAATGCA AACTGGAAATATGAATGGTGCCAAAACACCTGGTAATGGTGGAAAAAATAACGGTATCATTGCTCAATACGGAACTGATT TAACTAAATTAGCTCGTCAAGGTAAACTTGATCCAATGATTGGCCGAGAAAAACAAACTGCTCGAGCAATCGAAGTCTTA AATCGTCGCTCTAAAAACAACCCTGTTTTAATCGGTGAAGCAGGAGTTGGTAAGACAGCAATCGTAGAAGGTTTAGCGCA AAAGATTGCTGATGGAACTGTTCCTCAAAAACTTCGCAATAAGAAAATTATTCAAATCGATATGGTTTCAATGATTCAAG GAACTGGAATTCGTGGACAATTCGAAAAGAAGATGCAGACTCTTATCAAAGAAGTTAAAGCTGACAAAAATCTGATTCTT TTCATTGATGAAATTCATGAAATTGTAGGCGCTGGAAATTCTGAAGGTGGTCTTGATGCTGGAAATGTGCTTAAGCCAGC CTTGGCTCGTGGAGATTTCCAACTAATCGGTTCTACCACTCTCAAAGAATATCGCGATATTGAAAAAGATTCTGCTTTAG CGCGTCGTTTCCAACCAATTATGGTAGAAGAACCAACGACTGAACAAGCAATCAAAATTTTAAAAGGACTTCAAAAAAAT TACGAAGATTATCACATGGTTCATTATACCGAAGACGCAATTAATGCTGCCGTAAAACTATCTAACCGTTATATCAATGA TCGTTTCTTACCAGATAAAGCCATTGATTTAATGGATGAAACTGGTTCAAGAAAGAATCTAACGCTTAATATTATTGATC CAAAAGCAATTGACAAAGAAATTTCAGAAGCTGAAAAGCAAAAAGAAACTGCATTAGATAAAGAAGATTATGAAACTGCT GCATTTTATCGTGATCGGGAAAAACAACTCAATCGTCAAAAAGATAACCTTGCCCAAGAAAAAACAAAGAACAATACGGT TACTGAAAAAGATATGCAACAAGTTGTAGAAGAAATTACTAGCATTCCCGTTGCTGATTTAGAAGATCAAGAAAAAGCAC AACTTAAAAATTTAAATGTTAACCTTGAAAAACACGTAATTGGTCAAGGTAACGCTGTTAATAAAGTGGCTAAAGCAATT CAAAGAAATCGGGTTGGCTTTAACAAGTCTGGTCGTCCAATTGGTTCATTTCTCTTTGTCGGACCTACTGGAGTTGGTAA AACAGAACTTGCAAAGCAATTAGCTGAACAACTCTTTGGTTCAAAAGAATCAATTATTCGTTTTGATATGTCTGAATACC GTGAACCTCAATCAATTGCCAAACTAATTGGAGCCGCTCCCGGATACGTTGGATATGATGAAGCTGGTCAATTAACTGAA AAGGTTCGTCGTCATCCATACAGTTTGATTTTGTTAGATGAAGTTGAAAAAGCTCACTCAGATGTGCTTCACGCATTCTT ACAAGTTCTAGATGATGGTCGTTTAACCGATTCACAGGGGCGCACGGTATCATTTAAGGATACTGTCATCATCATGACCA GTAATGCTGGGGCAAACACGGGTGCTAACGTCGGTTTTGGTGCCGAAACGAGTGGCAGTACTCACTCTGTTTTAGATAAA TTAAGTGCCTACTTCAAGCCTGAATTTTTAAATCGATTTGATGATATCATCGAATTTAATTCATTAAATAAAAAAGAATT ACGTCAAATTGTAAACCTTCTTTTGAGTGATATGAATGAAACATTAGCGCAAAATGATTTAACTGTTGACGTCTCTGATG ACGTTAAAGAGCAATTAGTTGAACTAGGTTACAATCCGACAATGGGTGCTCGTCCATTACGTCGAGTAATTCAAGAACAA CTTGAAGATCAGGTAGCTGGATATTTGTTGGATAATCCTAATGTTAAAGCATTAAAAGCTACTCTAGATAAAAATAAAGA CATTAAAATTAGTGCCAAATAA Protein sequence : MKEVLNMEGQQGAYGFSNLDDLLRSMQTGNMNGAKTPGNGGKNNGIIAQYGTDLTKLARQGKLDPMIGREKQTARAIEVL NRRSKNNPVLIGEAGVGKTAIVEGLAQKIADGTVPQKLRNKKIIQIDMVSMIQGTGIRGQFEKKMQTLIKEVKADKNLIL FIDEIHEIVGAGNSEGGLDAGNVLKPALARGDFQLIGSTTLKEYRDIEKDSALARRFQPIMVEEPTTEQAIKILKGLQKN YEDYHMVHYTEDAINAAVKLSNRYINDRFLPDKAIDLMDETGSRKNLTLNIIDPKAIDKEISEAEKQKETALDKEDYETA AFYRDREKQLNRQKDNLAQEKTKNNTVTEKDMQQVVEEITSIPVADLEDQEKAQLKNLNVNLEKHVIGQGNAVNKVAKAI QRNRVGFNKSGRPIGSFLFVGPTGVGKTELAKQLAEQLFGSKESIIRFDMSEYREPQSIAKLIGAAPGYVGYDEAGQLTE KVRRHPYSLILLDEVEKAHSDVLHAFLQVLDDGRLTDSQGRTVSFKDTVIIMTSNAGANTGANVGFGAETSGSTHSVLDK LSAYFKPEFLNRFDDIIEFNSLNKKELRQIVNLLLSDMNETLAQNDLTVDVSDDVKEQLVELGYNPTMGARPLRRVIQEQ LEDQVAGYLLDNPNVKALKATLDKNKDIKISAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-151 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_004841371.1 | ATP-dependent Clp protease ATP-binding subunit clpE | VFG0080 | Protein | 0.0 | 60 |
| clpE | YP_004841371.1 | ATP-dependent Clp protease ATP-binding subunit clpE | VFG0079 | Protein | 2e-156 | 50 |
