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Name : RHOM_04305 (RHOM_04305) Accession : YP_004837915.1 Strain : Roseburia hominis A2-183 Genome accession: NC_015977 Putative virulence/resistance : Unknown Product : two-component system, OmpR family, KDP operon response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 932136 - 932837 bp Length : 702 bp Strand : - Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : ATGAATAAACCGCTTATACTTGTTGTGGAAGACGACCGCCCAGTCCGCAATCTGATCGTAACAACATTAAAGTCGCACGA TTACCGTTATCTGACTGCGGAGAACGGACATGGTGCGATTATGGAGGCGACCTCCCATAACCCTGATATCGTTCTGCTGG ATCTGGGTCTACCGGATATTGACGGCACACAGGTGATCGAAAGCATCCGCTCATGGTCGAATATGCCCATTATTGTGATC AGTGCGCGTAGCGAGGATCGTGATAAAATTATGGCACTTGACGCCGGGGCGGATGACTATTTGACAAAGCCATTTTCCGT AGAAGAGCTTTTGGCACGGCTTCGTGTCACACAAAGAAGGCTGTTGCTCCTGCAAGCAAGTGGCGATGCCGACACCCCAA TTTTTGAAAACGGCGAGCTTAAAATTGATTATGCCGCTGGTTGCGCTTACTTAAAAGGGGAAGAATTGCATCTTACCCCG ATTGAATACAAGCTTTTATGTCTGCTCTCCCATAATGTCGGAAAGGTTCTGACGCACACCTATATCACACAGCAGATCTG GGGCAGCAGCTGGGAAAACGATATTGCCTCGCTGCGGGTGTTTATGGCGACACTGCGTAAAAAACTGGAGCTGCAAAAGG ACAGTCCGCAATACATTCAGACGCATATCGGCGTTGGTTATCGGATGCTGCGGGTAGACTGA Protein sequence : MNKPLILVVEDDRPVRNLIVTTLKSHDYRYLTAENGHGAIMEATSHNPDIVLLDLGLPDIDGTQVIESIRSWSNMPIIVI SARSEDRDKIMALDAGADDYLTKPFSVEELLARLRVTQRRLLLLQASGDADTPIFENGELKIDYAAGCAYLKGEELHLTP IEYKLLCLLSHNVGKVLTHTYITQQIWGSSWENDIASLRVFMATLRKKLELQKDSPQYIQTHIGVGYRMLRVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-36 | 44 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 1e-35 | 43 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 1e-35 | 43 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 1e-35 | 43 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 1e-35 | 43 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 1e-35 | 43 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 5e-36 | 41 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 8e-36 | 41 |
