Gene Information

Name : RHOM_01995 (RHOM_01995)
Accession : YP_004837453.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 442493 - 443407 bp
Length : 915 bp
Strand : +
Note : COG1131 ABC-type multidrug transport system, ATPase component

DNA sequence :
TTGGATTATATTCTCAAAGCCGAGAATTTGACGAAGATTTACGGCCACCATAAAGCATTAGACAATTTTTCCATACACAT
TCCGCAGGGGAGTATCTATGGATTAGTAGGAAAAAATGGTGCTGGCAAAACAACCTTGCTTCGGATAATTTGCGGACTGC
AAGAAGCTACTTTCGGGGATTATTCCCTATATGGAATTAGCAGCCGAAAACACGAAATCCTGAACGCAAGAAAAGAAATG
GGGGCCGTGATTGAAACACCGGCTATCTATCTGGATATGTCGGCCACCGGAAACTTAAAGGAACAGTATCGTGTGTTGGG
ACTACGATCATTCGATACCATTCCTCAACTTCTGAAGTTGGTGGGCTTGGAGGATACCGGCAGGAAAAAGGCAAAGAATT
TTAGCTTAGGTATGAGGCAGCGATTAGGAATTGCGATTGCTCTTGTGGGAAATCCAAGGTTTTTGGTGTTAGACGAGCCG
ATCAACGGACTCGACCCGCAGGGCATCATTGAAATGCGGCAGCTTCTTTTGAACCTCAATCAGCAGTATGGTATTACCAT
TTTGGTATCCAGCCACATTCTCGATGAGCTGTCCCGTCTTGCTACGCATTACGGCTTTATCGACAACGGAAAAATGATTA
AAGAAATCAGTGCGGATGATTTGGAAAACTCGTTCCGCAAGTCTATTCGAATTGAAGTAACAGATGGCAAAGCGTTGGCC
GCCGTTTTGAAGCAGACAGGCCAACCTTACAAAATGCCTGCTCCCAATGTGGCAGAGATTTATCACAGGTTAAATATTTC
CCAGCTTACATCTGCCCTGGATAAGTACCATTGTGATCTGCTGTCCATTCAGGAACAGGAAGAAAATCTGGAAAGCTACT
ATGTTGATTTAATCGGAGGTGTTAGCCATGAGTAG

Protein sequence :
MDYILKAENLTKIYGHHKALDNFSIHIPQGSIYGLVGKNGAGKTTLLRIICGLQEATFGDYSLYGISSRKHEILNARKEM
GAVIETPAIYLDMSATGNLKEQYRVLGLRSFDTIPQLLKLVGLEDTGRKKAKNFSLGMRQRLGIAIALVGNPRFLVLDEP
INGLDPQGIIEMRQLLLNLNQQYGITILVSSHILDELSRLATHYGFIDNGKMIKEISADDLENSFRKSIRIEVTDGKALA
AVLKQTGQPYKMPAPNVAEIYHRLNISQLTSALDKYHCDLLSIQEQEENLESYYVDLIGGVSHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-28 43
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-28 43
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-28 43
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 3e-28 43
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 7e-25 41