Name : RHOM_01985 (RHOM_01985) Accession : YP_004837451.1 Strain : Roseburia hominis A2-183 Genome accession: NC_015977 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 439118 - 439783 bp Length : 666 bp Strand : + Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component DNA sequence : ATGAGCATTTTGCAAACGACTGAACTAAAAAAATATTATGGTTCAAAGCCCAATATTACGAAAGCACTGGATGGCGTAAC CCTCTCCATTGAGGATGGGGAGTTTGTGGCTATTGTTGGTACTTCTGGCAGTGGAAAATCCACACTTCTGAATATGATGG GAGGATTGGATACTCCAACTTCCGGCAGTATCAAAGTAAAAGGAAAAGAATTGTCGAAATTCAAGGATGAACAGCTTACC ATCTTCCGCAGACGCAACATCGGTTTTATCTTTCAGAATTACAATCTTGTTCCTGTGCTGAACGTCTATGAAAATATTGT TTTGCCGGTGGAGCTGGATGGTGATACCGTTGATAAGCATTTCATGAATGAAGTCGTGAAAATGCTGGCTCTCGATGAAA AGCTGAACAGTATGCCTAACAATCTGTCCGGTGGTCAGCAGCAGCGTGTAGCGATTGCCCGCGCCCTTGTTTCTAAACCG GCTATCATCCTGGCCGACGAACCTACTGGAAATCTTGACAGCAGAACCAGCAGCGATGTATTGGGTCTTTTGAAAATGAC CAGCCAGAAATTTCATCAGACCATTGTGATGATTACTCATAACAATGAGATCGCCCAGCTTGCCGACCGCATTATTCGTA TTGAGGACGGCCGGATTTCCGAGTAA Protein sequence : MSILQTTELKKYYGSKPNITKALDGVTLSIEDGEFVAIVGTSGSGKSTLLNMMGGLDTPTSGSIKVKGKELSKFKDEQLT IFRRRNIGFIFQNYNLVPVLNVYENIVLPVELDGDTVDKHFMNEVVKMLALDEKLNSMPNNLSGGQQQRVAIARALVSKP AIILADEPTGNLDSRTSSDVLGLLKMTSQKFHQTIVMITHNNEIAQLADRIIRIEDGRISE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-36 | 46 |
CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-37 | 45 |
cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 1e-37 | 45 |
CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-37 | 45 |
unnamed | AAP55232.1 | unknown | Not tested | SaPIbov2 | Protein | 1e-33 | 41 |
Spaf_1862 | YP_006310627.1 | amino acid ABC transporter ATP-binding protein | Not tested | FWisland_2 | Protein | 4e-27 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
RHOM_01985 | YP_004837451.1 | ABC transporter ATP-binding protein | CP001581.1.gene598.p | Protein | 2e-85 | 79 |
RHOM_01985 | YP_004837451.1 | ABC transporter ATP-binding protein | CP001581.1.gene798.p | Protein | 8e-59 | 56 |
RHOM_01985 | YP_004837451.1 | ABC transporter ATP-binding protein | NC_012469.1.7686878. | Protein | 7e-37 | 48 |
RHOM_01985 | YP_004837451.1 | ABC transporter ATP-binding protein | NC_012469.1.7685735. | Protein | 6e-38 | 42 |