Gene Information

Name : RHOM_01725 (RHOM_01725)
Accession : YP_004837399.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3655
EC number : -
Position : 380473 - 380745 bp
Length : 273 bp
Strand : +
Note : COG3655 Predicted transcriptional regulator

DNA sequence :
ATGCACATCAGCTATAAACCACTCTGGCACACACTGTTAGAGCGTGATATGAGGAAAGAGGATTTAAGGCTTGCTGCTGG
TATGACAACAAATATGATTGCCAACATGAGCAAAGAGGGAAAGCACATCAGCATGGATACATTAGCCCGTATCTGCGAAA
CGCTGAATTGTGAGATTACCGATGTGATTGAGTTAGTACCAGACGAGCCTGCTTCCACAGGAGGTAAGGAACATGAGAGA
ATTGAAACCAAGAATAACGGAAAACGGAATTGA

Protein sequence :
MHISYKPLWHTLLERDMRKEDLRLAAGMTTNMIANMSKEGKHISMDTLARICETLNCEITDVIELVPDEPASTGGKEHER
IETKNNGKRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1456 YP_005681720.1 hypothetical protein Not tested PiCp 5 Protein 1e-12 47
cpfrc_01461 YP_003783861.1 hypothetical protein Not tested PiCp 5 Protein 3e-13 47
CpC231_1455 YP_005683818.1 hypothetical protein Not tested PiCp 5 Protein 3e-13 47
CpI19_1462 YP_005685904.1 hypothetical protein Not tested PiCp 5 Protein 3e-13 47
SPN23F_09520 YP_002510935.1 regulatory protein Not tested PPI-1 Protein 5e-10 42
SP_1030 NP_345505.1 hypothetical protein Not tested PPI-1 Protein 5e-10 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHOM_01725 YP_004837399.1 hypothetical protein DQ212986.1.gene3.p01 Protein 4e-13 42