Gene Information

Name : RHOM_16640 (RHOM_16640)
Accession : YP_004840364.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3533787 - 3534233 bp
Length : 447 bp
Strand : -
Note : COG0629 Single-stranded DNA-binding protein

DNA sequence : 
ATGAACAAAGTGATTCTTATGGGAAGACTGACCAGAGATGCAGAGGTGCGTTACTCACAGGGTGAGAACTCCACCGCCAT
CGCAAGATTTTCGCTTGCGGTAGACCGCCGTTTCCGTCGTGACGGGGACGAGCAGACAGCAGATTTTATCAACTGCGTTG
CATTTGGCAGAACTGCAGAGTTTCTGGAGAGATTCGGACGTAAGGGAACTAAATTCGTTCTGGAGGGACGTATTCAGACC
GGAAGCTACACCAACAAGGACGGACAGCGTGTATACACGACGGACGTTGTTGCTGAGAATGTAGAGTTCGCAGAGAGCAA
GAATGCTTCCGGCGGCGGAGATAATTCCGGTTTTACCCCTTCCGACAGACCGTCACCGAGCAGTGCAGCGGGTGATGGCT
TCATGAATATTCCGGACGGAATTGATGAAGAGTTACCATTTAACTAA

Protein sequence : 
MNKVILMGRLTRDAEVRYSQGENSTAIARFSLAVDRRFRRDGDEQTADFINCVAFGRTAEFLERFGRKGTKFVLEGRIQT
GSYTNKDGQRVYTTDVVAENVEFAESKNASGGGDNSGFTPSDRPSPSSAAGDGFMNIPDGIDEELPFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 4e-34 48
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 8e-21 46
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 8e-21 46
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-18 45
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 5e-18 45
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-18 45
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-20 45
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 2e-20 45
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-20 45
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-20 45
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-19 44