Gene Information

Name : RHOM_01635 (RHOM_01635)
Accession : YP_004837381.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 363412 - 364020 bp
Length : 609 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATTATAATTCGTGGCTTAAATAAAGCATTTGGAGAGAAAATAATTTTCTCTAACTTTAATTTAGAAATTCCGGATGG
AAGTTTTGTAGTAATCAGCGGCGATAGCGGCAGTGGAAAAAGCACTTTACTCAATATGATTGGTGGTATCGAAAAACCGG
ATAGCGGCAGTATCATAATCGAAGGGCTGAATATTACCCGGCTTAAAAATAAAAACAGTTTTTTTGCGGATACAGTGGGG
TTTCTTTTTCAGAATTTTGCACTGCTTGAAAATAAGACAGTTAAAGAAAATTTAAGTTTGATTAAAAAATCAAGCCGAAC
TAAAGTATCACTTAAAGAAGCTCTTAATCGTGTGGGGTTATCAAAGGAAGTTAACAAAAAAGTTTATCAGCTTTCCGGTG
GTGAACAACAGAGAGTTGCTTTAGCTCGTCTTATGATGAAAAAATGTTCTGTTGTTTTGGCAGATGAACCTACTGGCTCA
CTTGACAAGAAAAATAGAGATATTGTTATGAGGTTATTGCACGAACTCAATGAAGAAGGTAAAACGGTTATCATTGTTAC
CCACGATCAGGGTATTATTGAAGATGAACCTTATGTTGTGAAAATCTGA

Protein sequence : 
MIIIRGLNKAFGEKIIFSNFNLEIPDGSFVVISGDSGSGKSTLLNMIGGIEKPDSGSIIIEGLNITRLKNKNSFFADTVG
FLFQNFALLENKTVKENLSLIKKSSRTKVSLKEALNRVGLSKEVNKKVYQLSGGEQQRVALARLMMKKCSVVLADEPTGS
LDKKNRDIVMRLLHELNEEGKTVIIVTHDQGIIEDEPYVVKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-37 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHOM_01635 YP_004837381.1 hypothetical protein NC_012469.1.7686946. Protein 2e-32 47
RHOM_01635 YP_004837381.1 hypothetical protein NC_012469.1.7686878. Protein 3e-28 43
RHOM_01635 YP_004837381.1 hypothetical protein NC_012469.1.7685735. Protein 1e-25 42