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Name : lysS (RHOM_15665) Accession : YP_004840171.1 Strain : Roseburia hominis A2-183 Genome accession: NC_015977 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3339194 - 3341131 bp Length : 1938 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGGCAGAGCAGAATAATAACCAGCAGCAGGACGTCAACCAGCTGCTCAAGGTTCGTTATGATAAGTTACACGAACTGCA GGAGAACGGAAAGGACCCGTTCGTCATTACCAAGTATGACGTGACGAATCACAGCACGGATGTCAAGGAGCATTTTGAGG AGATGGAAGGCAAGGAGGTATCTCTTGCCGGACGTATGATGTTCAAACGTGTCATGGGTAAGGCATCTTTCTGCAATATT CAGGACTTAAAGGGACGTATCCAGATCTATGTAGCGCGCGACAGCATCGGCGAGGAGTCCTACGCGGATTTCAAAAAGTA TGATGTCGGCGATATTTTAGGCGTGAAGGGTATCGTTTTTAAGACGAAAACAGGCGAGATTTCCATTCATGCAGCAGAGG TAACACTGCTTTCCAAGAGCTTACAGATTCTGCCGGAGAAGTTCCACGGACTGACGGATACCGATACCAGATATCGTCAG AGATATGTCGATCTCATCATGAATGAGGATGTGAAGGACACATTTGTGAAGCGTTCCAAGGTTATCAGCACGATCCGACG CTATCTGGACGGACAGGGCTTCATGGAGGTTGAGACCCCGATGCTCGTGTCGAATGCGGGCGGTGCGGCTGCAAGACCGT TTGAGACACATTTCAATGCGTTAGACGAGGACTTAAAGCTTCGTATTTCTCTGGAGCTTTACTTAAAGAGACTGATTGTC GGCGGCATGGAGCGTGTCTATGAGATTGGTCGCGTATTCCGTAATGAGGGTCTGGACACCAGACACAATCCGGAGTTCAC ACTCATGGAGCTGTATCAGGCATATACCGATTACCACGGCATGATGGATCTGACCGAGAACCTTTACCGCTATGTGGCAA AGGAAGTGACCGGTTCCGAGATGCTGACCTACGGGGAGCATACCATGGATCTCTCCAAGCCGTTTGAGCGCATTACCATG GTGGATGCGGTGAAGAAGTATGCAGGCGTCGATTTTAACGAGGTGAAGGATACCGCCGAGGCGAAGAAGCTTGCAGATGA GCATCACATCGAGTACGAGGAGCGTCACGAAAAGGGCGATATCTTAAATCTTTTCTTCGAGGAGTATGTCGAGGAGCACC TGATCCAGCCGACGTTCGTGATGGATCATCCGATCGAGATTTCTCCGCTCACGAAGAAGAAGCCGGAGAACCCGGACTAT GTAGAGCGTTTTGAGTTCTTCATGAACGGCTGGGAGATGGCAAATGCTTACTCTGAGCTGAATGATCCGATTGACCAGCG CGCGCGTTTTGCTGCCCAGGAGGAGGCTTTTGCAGCCGGAGATGAGGAAGCGAACCACACCGATGAGGATTTCTTGAATG CACTTTCCATCGGTATGCCGCCGACCGGAGGTATCGGATTCGGAATCGACCGTATGGTCATGATGATGACCAACAGCCCG GCGATCCGCGATGTACTGCTGTTCCCGACAATGAAGTCCTTAGACGCTAAGAAGGGCGAAGGGAAGGCTGAAAAGGCAGT AGAAAATGCTGCTGTGGCAGAGGAAAAGGTTGCAGAAAAGATTGATTTCTCCAACGTAAAAATCGAACCATTGTTTGAAG AAATGATTGATTTCGATACCTTTGCAAAGGCTGATTTCCGTGCAGTAAAGATTCTGGAATGTGAAGCAGTACCGAAGTCA AAGAAGCTTTTAAAGTTCACTCTGGATGACGGAACAGACCGGAAACGCACGATTTTAAGCGGTATTCACGAGTATTACGA GCCAGAAGATCTGATTGGCAAGACAGCGATTGCAATCGTAAATTTGCCTCCGAGAAAGATGATGGGCATTGATTCCGAGG GTATGCTGATTTCAGCAGTACACGAGGAAGATGGACATGAGGGATTAAATCTTCTCATGGTGAATGACCGGATTCCGGCA GGTGCGAAGTTGTACTAA Protein sequence : MAEQNNNQQQDVNQLLKVRYDKLHELQENGKDPFVITKYDVTNHSTDVKEHFEEMEGKEVSLAGRMMFKRVMGKASFCNI QDLKGRIQIYVARDSIGEESYADFKKYDVGDILGVKGIVFKTKTGEISIHAAEVTLLSKSLQILPEKFHGLTDTDTRYRQ RYVDLIMNEDVKDTFVKRSKVISTIRRYLDGQGFMEVETPMLVSNAGGAAARPFETHFNALDEDLKLRISLELYLKRLIV GGMERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRYVAKEVTGSEMLTYGEHTMDLSKPFERITM VDAVKKYAGVDFNEVKDTAEAKKLADEHHIEYEERHEKGDILNLFFEEYVEEHLIQPTFVMDHPIEISPLTKKKPENPDY VERFEFFMNGWEMANAYSELNDPIDQRARFAAQEEAFAAGDEEANHTDEDFLNALSIGMPPTGGIGFGIDRMVMMMTNSP AIRDVLLFPTMKSLDAKKGEGKAEKAVENAAVAEEKVAEKIDFSNVKIEPLFEEMIDFDTFAKADFRAVKILECEAVPKS KKLLKFTLDDGTDRKRTILSGIHEYYEPEDLIGKTAIAIVNLPPRKMMGIDSEGMLISAVHEEDGHEGLNLLMVNDRIPA GAKLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-111 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004840171.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-111 | 50 |
