Gene Information

Name : RHOM_15180 (RHOM_15180)
Accession : YP_004840074.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : -
Position : 3247057 - 3248046 bp
Length : 990 bp
Strand : -
Note : COG3049 Penicillin V acylase and related amidases

DNA sequence :
ATGTGTACAGCAGCAACTTACAAAACAAAAGATTTTTATATGGGCAGAACGCTTGATTATGAATTTTCCTATGGGGAACA
GATCACGATAACGCCAAGAAATTACGAATTTGATTTCCGGTTTGCCGGGAAGATAAAAAGCCATTATGCTTTGATCGGAA
TGGCATTTGTTGCAGGAGGTTATCCGCTTTATTATGATGCTGTTAATGAAAAAGGCCTTGGAATGGCAGGTCTTAATTTT
GTCGGCAATGCGGCATATGAAGAGGCTTTGCCGGAAGATGAAACAGAAGTCAGCCAAGTGGCACAGTTCGAGTTCATCCC
ATGGATCCTTACACAGTGTGCTACTGTAGCAGAGGTGAGAGAGAAGCTGGCAGCAATGAGACTGACAGGCACAGCATTCA
GTGAACAGCTGCCGACAGCACAGCTTCACTGGATCATTGCAGACAAAGACTCCTGTATCGTTGTTGAGTCTATGAAGGAT
GGGCTGCATGTATATGATAATCCGGTAGGAGTGCTTACCAATAATCCACCATTCCCGAGTCAGATGTTTGCACTGAATAA
TTATGCCGGAGTATCCAGAAAACAGCCGGAGAGTACTTTTGCAGGAGTATTACAGCTTGATGCATATAGCAGAGGAATGG
GGGGAATGGGAATACCTGGAGATCTTTCCAGCCAGTCAAGATTTGTGAAAGTTGCCTTTACAAAATTAAATTCGATCTCC
GGTGAAGAAGAGGATGAGAGTGTAAGCCAGTTCTTCCATATCTTAGGATCCGTAGATCAGCAGCGTGGATGTTGTGAGGT
GACAGAAGGCAAATATGAGATCACGATATACACGTCCTGTTGTAATACAGCAAAAGGTATTTATTATTATACGACTTATG
ATAATCATCAGATCACAGCGGTTGACATGCATGCGGAAAATCTGGATTCAGATCAGCTGATCTGTTATCCGCTTCTGTCC
AAGGGCGAAGTCAGATGGCAGAATAAATAA

Protein sequence :
MCTAATYKTKDFYMGRTLDYEFSYGEQITITPRNYEFDFRFAGKIKSHYALIGMAFVAGGYPLYYDAVNEKGLGMAGLNF
VGNAAYEEALPEDETEVSQVAQFEFIPWILTQCATVAEVREKLAAMRLTGTAFSEQLPTAQLHWIIADKDSCIVVESMKD
GLHVYDNPVGVLTNNPPFPSQMFALNNYAGVSRKQPESTFAGVLQLDAYSRGMGGMGIPGDLSSQSRFVKVAFTKLNSIS
GEEEDESVSQFFHILGSVDQQRGCCEVTEGKYEITIYTSCCNTAKGIYYYTTYDNHQITAVDMHAENLDSDQLICYPLLS
KGEVRWQNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 7e-93 59
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 5e-93 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHOM_15180 YP_004840074.1 choloylglycine hydrolase VFG2162 Protein 1e-97 62