Gene Information

Name : RHOM_15105 (RHOM_15105)
Accession : YP_004840059.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Unknown
Product : transposase IS200-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 3235706 - 3236221 bp
Length : 516 bp
Strand : -
Note : COG1943 Transposase and inactivated derivatives

DNA sequence :
GTGGACAATAAAAGCATATCACACACTAGATGGAAATGCCAATATCACATCGTTTTCATTCCCCAATATCGGAAAAAGGT
ATTGTATGGGAAGGTAAGAGAGGATGTACGTGAAATCTTAAATACACTATGCAAATATAAAAATGTAGAAATAATTGCGG
GAGCAGTTTGTGTAGATCACGTGCATTTAAGTGTCGCAATACCGCCGAAATTAAGTGTCTCAGATTTTATAGGATATTTA
AAGGGTAAAAGCACCCTAATGCTATACGATCGTCACCCAGAGTTGCAGAGTAAGTGGGATAAAGCATTTTGGGCAAGAGG
ATATTATGTGGAAACAATCGGTAATATCACAGACGAGGCAGTACAGAAGTATATAAAAGAACAAGCAGAAGAATCGAGAA
AGCGATTGACGAGATGGAAGGCTATAGCGAAATCATCAAGGAGAATATTGAGTATGACAGCCTTCTTCTGGCTCATCCAT
ATGACCAGGAGATGGTGGAGGGAATTTTTGACCTGA

Protein sequence :
MDNKSISHTRWKCQYHIVFIPQYRKKVLYGKVREDVREILNTLCKYKNVEIIAGAVCVDHVHLSVAIPPKLSVSDFIGYL
KGKSTLMLYDRHPELQSKWDKAFWARGYYVETIGNITDEAVQKYIKEQAEESRKRLTRWKAIAKSSRRILSMTAFFWLIH
MTRRWWREFLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 1e-33 53
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 9e-33 49
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-28 45