|
Name : RHOM_13690 (RHOM_13690) Accession : YP_004839776.1 Strain : Roseburia hominis A2-183 Genome accession: NC_015977 Putative virulence/resistance : Unknown Product : plasmid transfer factor-like protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 2964608 - 2966461 bp Length : 1854 bp Strand : - Note : COG3505 Type IV secretory pathway, VirD4 components DNA sequence : GTGAAGAACGATAGCATCAAAAAATACCTTATTCCCAACATCCCGTATCTGTTTGTCCTGTGGGCCTTTCTCAAGCTGGG GACGGCCTACCGTCTGGCGGCGGGTGCGGATTTTGCTCATAAGCTCATGGGGCTGGGCCAGACCATTGGCCCGGCCTTTG CCGACTTTGCCCCGGGGCTTGCTCCCTTTGACTGGCTCGTTGGCATTGTGGGGGCTGTGGCGTTCCGGGTAATGGTCTAT GTGAAAAGTAAAAACGCTAAAAAATTTCGGCGGGATGAGGAGTATGGATCAGCCCGTTGGGGCTGTCCGAAAGATATAGC CCCTTTCGTAGATCCAAAGTTTGAAAACAACATCATTCTGACCGGGACGGAGTTCCTTACCATGAATACCCGTCCGAAAA ATCCGGCCAACGCCCGCAACCTCAATGCCTGTGTGATCGGTTCGTCCGGCTCCGGCAAAACCCGGTTCTGGCTTACCCCG CAGATTTTGCAGGCCAGCGCAGACAAAAACGGCGGATGCAGCTATGTGTGTGTCGATCCCAAAGGAGGCGTTCTCGGGCA GGTGGGCCACTTCCTGCAAAAGCGTGGGTATCGGATCAAGGTGTTCAATTCCATTGATTTCACAAAATCCATGCACTATA ACCCGCTGGCGTACATCCGCAACGAGGCCGACATCCTTAAATTTGTGGACGCTCTCATTTCCAACACAAAAGGCGAAGGC AAGGAAGGCGATCCATTCTGGACAAAATCGGAAACCCTGCTTTACTGCGCCCTCATCGCCTATATCATTTTTGAGGGCCC CGCCGAGGATCGGAACATGAACACATTGGTTGACATGATTTCCGGGATGGAGGTCAAGGAGGATGACGAGGATTTTATGA ACGCCGTGGACTATATGTTTGCGGGCCTGGAAAAACGAAAGCCGGATTGCTTTGCGGTCAAGCAGTATAAAAAGTACAAA CTGGCCAGCGGCAAAACAGCAAAGTCGATCCTTATTTCCTGCGGTGCAAGGCTGGCTCCCTTTGACATCCCCCAGCTTAG GGAGGTCATGGCCTATGACGAGCTGGAGCTTGACCGCATCGGGGATCGAAAAACGGCGGTGTTCTTTATCATCTCGGACA CTACGCAAACCTATAATTTCCTTGTGGCTCTGGCCTTTTCGCAGATGTTCAATCTGCTGTGCGAGAGGGCCGACAATGTT CACGGAGGCCGCCTGCCCCATCATGTACGGGTGCTGTGGGACGAGGCCGCCAACACAGGGCAGGTTCCCCAGCTTGAAAA GATCGTGGCTGTCATCCGTTCCCGTGAGATCAGCTTAACGCTGTTCTATCAGCAGTTGGCGCAGTGTAAGGCGATTTACG ATAAACACGCCGAAACCATTTTGGGAAATATGGACAGCGTGATATTCCTCGGGGGCCGGGAGGCCAGCACCATCAAGGAA ATATCCGAGAACTGGCTGGGTAAGGCTACAATCTCCATGCAGACCGACAGCCGCTCCCGTGGCCAGTCGGAAAGCTACAG CCAAAATAACCAGCGGCTGGGCCGGGAGCTGATGACACCCAGCGAACTGGCGACCATGCCCGGGGATAAGTGTATTTTAC AGCTTCGGGGCCTGCCCCCGTTCTATTCCCCAAAATACGATTTGAAAAAGCACCCGAACTACCGATATACGGCTGAAGCC GACAAAAAGAAAAACGCCTTTGACCTTGACCGGCTCATTAACCGCCGCAGGCGGCCCGGGCCGGACGAGCTGTGTGAGGT GTATGCCGTGGCTGTGCCGGACGATGGGCTCACAAGCGAGGACGAGGACATCCTCAATTATGATGACATCGACGATCCGG ACGCCTTTGCATAA Protein sequence : MKNDSIKKYLIPNIPYLFVLWAFLKLGTAYRLAAGADFAHKLMGLGQTIGPAFADFAPGLAPFDWLVGIVGAVAFRVMVY VKSKNAKKFRRDEEYGSARWGCPKDIAPFVDPKFENNIILTGTEFLTMNTRPKNPANARNLNACVIGSSGSGKTRFWLTP QILQASADKNGGCSYVCVDPKGGVLGQVGHFLQKRGYRIKVFNSIDFTKSMHYNPLAYIRNEADILKFVDALISNTKGEG KEGDPFWTKSETLLYCALIAYIIFEGPAEDRNMNTLVDMISGMEVKEDDEDFMNAVDYMFAGLEKRKPDCFAVKQYKKYK LASGKTAKSILISCGARLAPFDIPQLREVMAYDELELDRIGDRKTAVFFIISDTTQTYNFLVALAFSQMFNLLCERADNV HGGRLPHHVRVLWDEAANTGQVPQLEKIVAVIRSREISLTLFYQQLAQCKAIYDKHAETILGNMDSVIFLGGREASTIKE ISENWLGKATISMQTDSRSRGQSESYSQNNQRLGRELMTPSELATMPGDKCILQLRGLPPFYSPKYDLKKHPNYRYTAEA DKKKNAFDLDRLINRRRRPGPDELCEVYAVAVPDDGLTSEDEDILNYDDIDDPDAFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 1e-133 | 53 |
