Gene Information

Name : RHOM_12095 (RHOM_12095)
Accession : YP_004839459.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Virulence
Product : glycosyltransferase-like protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 2636243 - 2637187 bp
Length : 945 bp
Strand : -
Note : COG0463 Glycosyltransferases involved in cell wall biogenesis

DNA sequence : 
ATGAAGATTTCACTGATAGTCCCCTGCTATAATGAGGAGGAAGCATTGCCGATTTTTTATCGGGAGACGAAGAACGTGTT
GGAAACCATGCCATGCGAGCATGAGTTTGTGTTTATCAATGACGGATCGAGAGACCGGACATTGGCTGTCTTAAAGGAAC
TGGCAGGGCAGGATGGCTGTGTGCAGTACCTTTCCTTTTCCAGAAATTTCGGAAAGGAAGCGGCAATGTATGCAGGATTT
TGCAATGTCACCGGAGACTACGTTGCAGTGATGGATGCTGATATGCAGGATCCGCCGGCGCTTCTTCCGGAGATGTTAGA
CAAGCTTCTGACAGGTGAATATGACAGTGTAGCAACCTGCCGTGTGACCAGAAAAGGAGAGCCGCCGATTCGGAGCTGGT
TTGCCCGGTTGTTTTACCGGATGATCAACCGCGTGTCAGATGCGGATATCGTGGATGGGGCACGGGATTTTCGGCTGATG
CGGCGTGAGATGGTAGATGCGATCGTTGAGATGGGAGAGTATAACCGTTTTTCCAAGGGGATTTTTGGCTGGATCGGATT
TCGGACATGCTGGCTGCCGTATGAGAATGTGAACCGGGTGGCAGGCGAGACGAAATGGAATTTCTGGAAGCTGTTTAAGT
ATGCGATTGATGGGATTATCAATTTTTCACAGGCACCATTGGCATTTGCATCCTGGTTTGGAATGTTCATGACAGTGTTG
TCCTTTGTGGCGGTGATTTTTATTATTATACGAAAGCTTGTCTTTGGAGATCCCGTGACCGGATGGGCATCCACAGCGTG
TATCATTACATTTATTGGCGGTGTACAGCTTTTTTGTATGGGAATTATGGGGCAATACATTGCCAAAACATACCTCGAAG
TAAAAAAACGTCCGCATTATATTGTCGCAGAGAGCAATATGGACGAAGTGAAACGGATAAAATAG

Protein sequence : 
MKISLIVPCYNEEEALPIFYRETKNVLETMPCEHEFVFINDGSRDRTLAVLKELAGQDGCVQYLSFSRNFGKEAAMYAGF
CNVTGDYVAVMDADMQDPPALLPEMLDKLLTGEYDSVATCRVTRKGEPPIRSWFARLFYRMINRVSDADIVDGARDFRLM
RREMVDAIVEMGEYNRFSKGIFGWIGFRTCWLPYENVNRVAGETKWNFWKLFKYAIDGIINFSQAPLAFASWFGMFMTVL
SFVAVIFIIIRKLVFGDPVTGWASTACIITFIGGVQLFCMGIMGQYIAKTYLEVKKRPHYIVAESNMDEVKRIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 8e-55 43
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 5e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHOM_12095 YP_004839459.1 glycosyltransferase-like protein VFG0670 Protein 7e-56 44