Gene Information

Name : RHOM_11705 (RHOM_11705)
Accession : YP_004839381.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Resistance
Product : ABC transporter ATP binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2548130 - 2548819 bp
Length : 690 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATACTGAATCTGCAGAATATCTACAAAGACTATCAGCAGGAGAAGCTGGTTGTGCCGGTGTTAAAGGATGTATCGCT
GACGGTCGAGGAAGGAGAGTATGTCGCCATTATGGGACCGTCCGGTTCCGGTAAGACCACACTGATGAATATTATCGGGT
GTCTCGACCGACCGACGAGCGGTACTTACGAGCTGGCGGGGGAGAACGTGCTCAAATTAAAAGACAGGGAACTCTCGGAT
CTCCGCTTAAAGAGCATCGGGTTCGTGTTCCAGAGTTTTCAGCTGATGCCGCGGGAGAGCGCCGTGGAAAATGTGGCGCT
TCCGCTCAGCTACGCCGGAGTGCGCAAAAAGGAGAGGCGGATCCGCGCGACGAAAGCGCTCGAGAGAGTGGGACTCGGGG
ATCGTGTCAATTTCAGACCGACACAGCTTTCCGGCGGACAGAAGCAGCGTGTCGCCATCGCCCGCGCGATGGTCAACCAT
CCTAAGATTCTGCTGGCAGATGAGCCGACAGGAGCTCTGGACTCCAAATCCGGCGAGCAGATCATGGAGCTTTTTGACAG
CCTGAACGAAGAGGGCGTTACCATCGTCATGATTACGCATGATCCCAGGATTGCGGCGAAAGCCAAGCGGATTGTCCGGA
TCATCGACGGTGAGATCTATGAGGGAGAGGGGGACGGAGCGGTATCATGA

Protein sequence : 
MILNLQNIYKDYQQEKLVVPVLKDVSLTVEEGEYVAIMGPSGSGKTTLMNIIGCLDRPTSGTYELAGENVLKLKDRELSD
LRLKSIGFVFQSFQLMPRESAVENVALPLSYAGVRKKERRIRATKALERVGLGDRVNFRPTQLSGGQKQRVAIARAMVNH
PKILLADEPTGALDSKSGEQIMELFDSLNEEGVTIVMITHDPRIAAKAKRIVRIIDGEIYEGEGDGAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-32 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHOM_11705 YP_004839381.1 ABC transporter ATP binding protein NC_012469.1.7686878. Protein 3e-53 56
RHOM_11705 YP_004839381.1 ABC transporter ATP binding protein NC_008702.1.4606598. Protein 2e-45 52
RHOM_11705 YP_004839381.1 ABC transporter ATP binding protein CP001581.1.gene598.p Protein 6e-31 43
RHOM_11705 YP_004839381.1 ABC transporter ATP binding protein CP001581.1.gene798.p Protein 2e-32 43