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Name : RHOM_11330 (RHOM_11330) Accession : YP_004839306.1 Strain : Roseburia hominis A2-183 Genome accession: NC_015977 Putative virulence/resistance : Unknown Product : tmRNA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2459392 - 2459859 bp Length : 468 bp Strand : - Note : COG0691 tmRNA-binding protein DNA sequence : ATGGCAAAGACCGAGAAGAAGTTAATCGCGAATAACAAAAAAGCCTACCATGACTATTTCCTGGAGGAGCGGTTTGAGGC GGGCATTGAACTGCACGGGACGGAAGTGAAGTCCATGCGCATGGGCAAGTGTTCGATCAAGGAAGCGTTTGTGCGCATCG AGAACGGTGAGGTCATCGTCTACGGCATGCACGTCAGCCCTTATGAGAAGGGCAACATTTTCAACAAAGATCCGCTCCGC CCCAAGAAGCTTCTGATGCACAAGTCAGAGATCCGGAAGCTGACGGGAAAGCTTGCAGAGCAGGGCTACACGCTGGTTCC GGTGGAGGTATATCTGAAGGGAAGCCTCGTGAAGGTGGAGATTGCACTTGCCAAAGGTAAGAAGCTCTACGACAAGCGGC AGGACATTGCGAAGAAAGACATGCGCCGCGAGGCAGAGCGTGATTTCAAGGTAAAGAATCTGTATTAG Protein sequence : MAKTEKKLIANNKKAYHDYFLEERFEAGIELHGTEVKSMRMGKCSIKEAFVRIENGEVIVYGMHVSPYEKGNIFNKDPLR PKKLLMHKSEIRKLTGKLAEQGYTLVPVEVYLKGSLVKVEIALAKGKKLYDKRQDIAKKDMRREAERDFKVKNLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 3e-31 | 49 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-27 | 45 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-25 | 43 |
