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Name : RHOM_10340 (RHOM_10340) Accession : YP_004839111.1 Strain : Roseburia hominis A2-183 Genome accession: NC_015977 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 2247991 - 2250351 bp Length : 2361 bp Strand : - Note : COG3451 Type IV secretory pathway, VirB4 components DNA sequence : TTGAAAAACACAAAGAAGAAAAACGGAGCCGCCGCCAAGGGTAAAGGCCGGGCGGCCCTGTCTGCCCAGCAGACAATCCC GTATCTGTCCATGCACCCGGACGGTGTGTGCAAGCTCCCGGGTGGGCTCTATACAAAAACTGTGGAATATGAGGACATCA ATTACTCCGTGGCATCCACCGAGGATCAGACTGCCATATTCAGCGGATGGAGTTCATTTCTCAACTACTTTGACAGTTCG CTGCCGTTCCAGCTTTCCTTTATCAATCGCCGTTCCCATTCCCGCAGCCGCTATCAAGTCAATATCCCGAAAGCGGATGA CAACTATAACAGCGTCCGGGACGAGTTTACCGGGATGCTGAAAAATCAGATTGCCAAAAGCAATAACGGCATTGAACGCT CAAAATACATCACCTTTGGCATACCCGCCGAGGGGATTGCGGAGGCTCGGCCCCGTCTGGAGCGTGTGGAGGCTGATGTC ATGGGAAACTTTAAGCGGCTGGGCGTTCCCTCGGAGCCTATGGACGGGCGGGCCCGCCTTGCGCTGCTTCATAGCCAGAT GCATCCGGGGAGCCGCGAGGCGTTCCGCTTTTCGTGGAAAGACATCCCACAGACCGGGCTTGGCACAAAAGACTTTATTG CCCCGGACAGTCTCGACTTCCGCCAGTCCCGCACATTCCGTATCGGCCAGTATTGGGGCGCGGTGTCCTACTTACAGATT ATGGCATCGGAGCTTTCGGATAAGTTGTTGGCAGAAATCTTGGAGCTGGATGCGGAAATGACCGTGACCATGCACATTCA GACCGTGGATCAGCTCAAGGCAATTAAGACCATCAAGGGGAAAATCTCGGACATCGGAAAAATGAAAGTGGAGGAACAGA GAAAGGCTGTGCGCTCCGGCTATGACCCGGATATTCTTCCCCCTGACCTGATTACATTCAGCAAGGACGCAGCGGAGCTT CTGGCTGATTTGCAATCCCGCAATGAGCGAATGTTTCTGCTGACCTTTACGGTGGTAAACCTTGCTCCTAACCGCCAGCG GCTGGAAAACGATGTGTTTACCGTGGGCGGTATCGCGCAGAAATACAACTGCGCTCTGCGCCGTCTGGACTGGCAACAGG AACAGGGCTTTGTTTCCTCGTTGGCCCTTGGTTACAACGAGGTAGAAATCCAGCGCGGTATGACCACCAGCTCCACAGCC ATCTTTATTCCTTTTATGACAAGGGAGCTCCGCATGGCTGGGCAGGCCCTCTACTATGGCATGAACGCACTTTCTCACAA TGTCATCATGGCTGACCGCAAAAAGCTGAAATCGGCAAACGGGATGTATTTGGGCTCTACGGGCTCCGGCAAGAGCTTTG CCGCAAAGCGCGAGCTCTTGAATGTGTTTCTCACCATCCCGCAGGATCGGATCATCGTGGTTGACCCGATGGGCGAATAC GCTCCGCTGGTGCGAAGGCTGGGCGGCCAGGTGATCGAGATTGCCCCGGACAGCCCGCACCACCTCAATCCGATGGATGT GGAGCTCAATATGGCCGCCGGAGAAAGCCCGCTTTCCATGAAGGCGGATTTTCTTTTGTCCCTATGCGAGCTGGTGGTCG GCGGCAAGGAAGGCTTGCAGCCCATTGAAAAGACGGTCATTGACCGCTGTGTGCGTTTGGTGTACCGGGAACAGGCGCTC GGACTGGAAACTGCAAAAACACCGCTGTTGCAGGATTTGTACGAAGAGCTCTTACGCCAGCCGGAGCCCGAAGCCCGGCG CGTGGCAACTGCCTTAGAGCTTTATTGCACAGGCTCCCTCAATCTCTTTAACCATCCTACCAACGTCAAGACGGACAGCC GTGTGGTGTGCATCGTTCTGAAAAACATGGGCGAAAACCTTAGAAAGATTGCAATGCACATCACAAATGAGTTTGTTTCG CAGGCGGTGGATCAGAACTTCCACGAGGGTGCGGCGACTTGGTGCTACTTTGACGAGTTTCATATCCTGCTCCGCGATCC GCTGACAGCCAGCTACTTTGTGGCAGTCTGGAAAATGCTACGTAAAAAAGGATGTGTGCCGTCTGCTTTGACGCAGAACG TCAAAGACCTTTTGGCCAGCCGGGAAATCGAGAACATTTTGGACAACACGGATTTTATGATTCTGCTTTCGCAGGCGCAG AGTGACCGTACCATTCTGGCAAAACAGCTCGGTATTTCCGAGCATCAGCTTTCCTATATCACACACAGCAATTCCGGCGA GGGGCTGTTGTTCTATGGAAATGTAACCATTCCGTTTGTGGATCGGTTCCCTCGCGGAGAAATCTATGACCTGCTGACTA CCCGCCCGGAGGATATGAAGAATGAAACGAAAAACGAATAA Protein sequence : MKNTKKKNGAAAKGKGRAALSAQQTIPYLSMHPDGVCKLPGGLYTKTVEYEDINYSVASTEDQTAIFSGWSSFLNYFDSS LPFQLSFINRRSHSRSRYQVNIPKADDNYNSVRDEFTGMLKNQIAKSNNGIERSKYITFGIPAEGIAEARPRLERVEADV MGNFKRLGVPSEPMDGRARLALLHSQMHPGSREAFRFSWKDIPQTGLGTKDFIAPDSLDFRQSRTFRIGQYWGAVSYLQI MASELSDKLLAEILELDAEMTVTMHIQTVDQLKAIKTIKGKISDIGKMKVEEQRKAVRSGYDPDILPPDLITFSKDAAEL LADLQSRNERMFLLTFTVVNLAPNRQRLENDVFTVGGIAQKYNCALRRLDWQQEQGFVSSLALGYNEVEIQRGMTTSSTA IFIPFMTRELRMAGQALYYGMNALSHNVIMADRKKLKSANGMYLGSTGSGKSFAAKRELLNVFLTIPQDRIIVVDPMGEY APLVRRLGGQVIEIAPDSPHHLNPMDVELNMAAGESPLSMKADFLLSLCELVVGGKEGLQPIEKTVIDRCVRLVYREQAL GLETAKTPLLQDLYEELLRQPEPEARRVATALELYCTGSLNLFNHPTNVKTDSRVVCIVLKNMGENLRKIAMHITNEFVS QAVDQNFHEGAATWCYFDEFHILLRDPLTASYFVAVWKMLRKKGCVPSALTQNVKDLLASREIENILDNTDFMILLSQAQ SDRTILAKQLGISEHQLSYITHSNSGEGLLFYGNVTIPFVDRFPRGEIYDLLTTRPEDMKNETKNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2320 | NP_815976.1 | traE protein | Not tested | Not named | Protein | 0.0 | 58 |
| EFAU085_00716 | YP_008394240.1 | Type IV secretory pathway, VirB4 component | Virulence | Not named | Protein | 0.0 | 50 |
