Gene Information

Name : RHOM_09120 (RHOM_09120)
Accession : YP_004838867.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Unknown
Product : transposase IS116/IS110/IS902 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 1988541 - 1989761 bp
Length : 1221 bp
Strand : +
Note : COG3547 Transposase and inactivated derivatives

DNA sequence :
ATGAAACAAATAGTAAGTGTAGGAATCGATGTATCAAAAGGGAAAAGCACTGTCTGTGCCATGATACATCCTAATACGAT
TATTAAGGAATCGTTTGAAGTTTTGCATACCGTAGAAGAAATGTCAATGTTAGCTGATTACATCGGATCACTTGATGGAG
AAATTCGTATTGTAATGGAATCAACAGGGCATTATCATCTTCCGGTTGCACAATTTCTGTATCAAAAAGGCTTTTTTGTA
TGTGTTGAAAATGCATATATTATACGACAATTTTCACGCATTATGCTGCATGGCGCAAAAACAGATCCGCTTGATGCAAA
AAAATTAGCAAAGTACGGTTTGGCATACTGGAGTGAACTGAAACCATATAAATTTCATCCAAGCTGCTACACAGAATTAA
GTCTATTATCCAAGCAGTATCAGACATACATAAAGCTTTTGATTGTTGCTAAACAGAATGTAATACATTTGATGGATGAG
ATGCTTCCTGGTTTCAAAGAAGCGCTGGATACAGCAAGCAGTGTTCAATTCTCAAAAGTGAAATATGTGGATTTTGCCAA
AGAATTCTATCATGTTGATATGATAAAAAGCATGGGAAAAGAAATTTTTCGAGAGAATTATAAGCAATGGTGTAAAGAAA
AAGGATACCGTTTCCAATCAGAAAAGGCAGACGAGCTTTTTCACTTGGCGGAAGACGGTATCCCTACACTACCAACAGAG
TTCCCTTCAACCAGACTCTGTATGGAAGTAGCAACAGAGCAAGTAAGCCAATTAGGTTATGCTCTAGAACAAATATTATC
ACAAATGCAAAATCTTGCAAAGACTTTACCAGAATATCAAACGATACGCCAAATGGGAGGCATGGGTGAAAAGTTATGTG
TAAGGTTTATAGCTGACATTGGAGACGTTCGACGTTTCCATAATGGCAAAGCATTAGTTGCTTATGCGGGAATTGATGCT
CCGCCTTATCAATCAGGACAATATACCGGCACCAAACGTAGAATAAGCAAACGCGGAAACAGTGCATTAAGGAAAACCGG
TTATGAGGTTATGAAAAGTCTGAAATCCCATCCGCCCAAAACAGATACTCGTGTCTATGATTTTATAATTAAAAAAGAGA
ATGAAGGAAAAAGTAAGAAACAAGCCAAAATAGCCGGTTTAAATAAGTTTTTGCAAATCTATTATGCAAGAGTAATGGAA
ATATATAAGAATATAGTATAG

Protein sequence :
MKQIVSVGIDVSKGKSTVCAMIHPNTIIKESFEVLHTVEEMSMLADYIGSLDGEIRIVMESTGHYHLPVAQFLYQKGFFV
CVENAYIIRQFSRIMLHGAKTDPLDAKKLAKYGLAYWSELKPYKFHPSCYTELSLLSKQYQTYIKLLIVAKQNVIHLMDE
MLPGFKEALDTASSVQFSKVKYVDFAKEFYHVDMIKSMGKEIFRENYKQWCKEKGYRFQSEKADELFHLAEDGIPTLPTE
FPSTRLCMEVATEQVSQLGYALEQILSQMQNLAKTLPEYQTIRQMGGMGEKLCVRFIADIGDVRRFHNGKALVAYAGIDA
PPYQSGQYTGTKRRISKRGNSALRKTGYEVMKSLKSHPPKTDTRVYDFIIKKENEGKSKKQAKIAGLNKFLQIYYARVME
IYKNIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00684 YP_008394208.1 IS110, transposase Not tested Not named Protein 9e-65 42