Gene Information

Name : RHOM_07785 (RHOM_07785)
Accession : YP_004838602.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Unknown
Product : rRNA large subunit methyltransferase
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1694680 - 1695171 bp
Length : 492 bp
Strand : -
Note : COG1576 Uncharacterized conserved protein

DNA sequence :
ATGAAGATTACAATTTTATGCGTTGGAAAAATCAAAGAAAAATTTTACAGAGATGCCATCGAGGAATACGCTAAGCGCCT
GACGCGCTATTGCAAGCTGGAAATCATCGAGGTCGCAGATGAAAAGACGCCAGACGGCGCAAGTGCCACGGAAGAAATGC
AGATCCGGCAAAAGGAGGGGGAGCGTGTGCTTGCCCGCCTCGAGAAATGCAGGCAGAGCAGCTCCTATGTCATGGCACTC
GCCATAGACGGCAGAGAACTCGATTCGGTCGAACTCTCACAGAAACTGGAAAAACTGGGAACTGACGGGATCAGCAATGT
GATCTTTTTGATCGGTGGGTCACTCGGCATGTCAAAAGAGCTGCTTGCGGCGGCGGATTTTAAGCTCTCTTTTTCCAGAA
TGACGTTTCCACACCAGCTGATGCGCGTGATTCTGCTGGAGCAGATCTACCGCGGCTACCGCATCATGAACCGGGAACCC
TACCACAAATAG

Protein sequence :
MKITILCVGKIKEKFYRDAIEEYAKRLTRYCKLEIIEVADEKTPDGASATEEMQIRQKEGERVLARLEKCRQSSSYVMAL
AIDGRELDSVELSQKLEKLGTDGISNVIFLIGGSLGMSKELLAAADFKLSFSRMTFPHQLMRVILLEQIYRGYRIMNREP
YHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 7e-40 54
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-41 51
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-41 51
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-41 51
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-41 51
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-41 51
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-41 51
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-41 51
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-41 51
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-41 51
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 3e-39 51
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-41 51
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-39 51
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-41 51
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-41 51
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 7e-25 50
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-40 50
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 3e-40 50
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 7e-37 49