Gene Information

Name : RHOM_07285 (RHOM_07285)
Accession : YP_004838502.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1592970 - 1593713 bp
Length : 744 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGGGATGTTCCGGAAAGAGGAGATTATGTCGGAGGAAGAAAAGAAATTTCTGGAAATTGTTGATCTGAAAAAGGGATT
TGGAAGCGGCGAGACACGGCAGGAGGTACTGCGCGGGATGAACTTTTCCGTGGCGAAGGGAGAGTTCTGCGTGCTGCTCG
GACCGTCCGGCTCCGGAAAATCGACGCTGCTCAATATTATCGGAGGCATTGACAGCGCGGATTCCGGTTATATCTCGATC
GGCGGTGATAAGCTGGAGGAGATGAGTGAGAAGAAACTAACGCAATACCGGCGCAAGCATCTTGGTTATGTCTTTCAGAT
GTATAACCTGATCGGGAATCTGAACGTAAAGGAAAATATCGAGGTCGGCGCGTATCTGTCCGATCATGCGCTGGATATTG
ATGAACTGTTACATACGCTGGGACTTTATGAGCACAGATACAAGCTCCCGAATCAGCTCTCCGGCGGTCAGCAGCAGAGA
GTATCCATCGGAAGGGCGATCGTCAAGAACCCGGATATTCTGCTCTGTGATGAGCCGACGGGCGCACTCGATTATCATAC
GTCCAAAGAGATCTTAAAGCTGATCGAGGATGTGAATATAAAATACGGCAATACGGTTATTATGGTTACGCACAACGAGG
CGATCCGGCATATGGCAGATCATGTGATCAAGCTGCGCGACGGGGAAGTACGTCACAATGAGATCAACACGGATAAAGTT
TCAGCGGCAGATCTGGAATGGTAA

Protein sequence : 
MGMFRKEEIMSEEEKKFLEIVDLKKGFGSGETRQEVLRGMNFSVAKGEFCVLLGPSGSGKSTLLNIIGGIDSADSGYISI
GGDKLEEMSEKKLTQYRRKHLGYVFQMYNLIGNLNVKENIEVGAYLSDHALDIDELLHTLGLYEHRYKLPNQLSGGQQQR
VSIGRAIVKNPDILLCDEPTGALDYHTSKEILKLIEDVNIKYGNTVIMVTHNEAIRHMADHVIKLRDGEVRHNEINTDKV
SAADLEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-38 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHOM_07285 YP_004838502.1 hypothetical protein NC_012469.1.7685735. Protein 4e-46 47
RHOM_07285 YP_004838502.1 hypothetical protein CP001581.1.gene798.p Protein 2e-44 45