Gene Information

Name : RHOM_07030 (RHOM_07030)
Accession : YP_004838453.1
Strain : Roseburia hominis A2-183
Genome accession: NC_015977
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1546096 - 1546365 bp
Length : 270 bp
Strand : +
Note : COG1987 Flagellar biosynthesis pathway, component FliQ

DNA sequence :
ATGACAGAAGGACAGGTATTAGACATTGCCAGACAGGCATTGTATACAATTATTTTGTGCTCGGCGCCGCTGCTGATTAT
TTCTCTGGTTGTGGGACTGATCGTCAGTATTTTTCAGACGGTGACGTCCATTCAGGAACAGACGCTTACCTTCGTGCCAA
AGATTGTCTGTGTATTTCTTGGAATGATGATATTTGGTTCCTGGATACTAACCAATCTGACAGAGTTTATCAATACGCTC
TGGTCAGACTTTAGTATATATCTGGGTTAG

Protein sequence :
MTEGQVLDIARQALYTIILCSAPLLIISLVVGLIVSIFQTVTSIQEQTLTFVPKIVCVFLGMMIFGSWILTNLTEFINTL
WSDFSIYLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epaQ AAZ31292.1 EpaQ Virulence ETT2 Protein 0.015 41
ECs3724 NP_311751.1 EpaQ Not tested LIM Protein 0.020 41
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 0.008 41
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 0.008 41
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 0.008 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHOM_07030 YP_004838453.1 hypothetical protein VFG2495 Protein 3e-06 44
RHOM_07030 YP_004838453.1 hypothetical protein VFG2132 Protein 9e-04 42