|
Name : RHOM_05055 (RHOM_05055) Accession : YP_004838062.1 Strain : Roseburia hominis A2-183 Genome accession: NC_015977 Putative virulence/resistance : Unknown Product : transposase IS200-family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 1104367 - 1104822 bp Length : 456 bp Strand : + Note : COG1943 Transposase and inactivated derivatives DNA sequence : ATGGCGAATAAGTCTAATGATCTCGCCCATACAAAATGGATGTGTAAATACCATATTGTATTTACTCCTAAGTATAGACG AAAAATTATTTATAATCAATTAAAAGAGGATATACGTGATATTCTGAAACAGTTATGTGCATATAAGGGCGTGGAGATTA TTGAAGGGCATCTCATGCCTGACCATATTCATATGCTAGTAAGTATTCCGCCAAAGATGAGTGTGTCGAGTTTTATGGGA TATTTAAAGGGAAAGTCATCGCTTATGATTTTTGACAGACATGCAAATCTCAAATATAAATTTGGAAACAGACATTTTTG GTCAGAGGGATATTATGTCAGCACCGTAGGATTAAATGAAGCGACAATAAAAAAATACATTCAAGATCAAGAAAAGTACG ATATCATGCAAGATAAATTAAGTGTGAAGGAGTACGAAGACCCTTTTAAGGGTTAA Protein sequence : MANKSNDLAHTKWMCKYHIVFTPKYRRKIIYNQLKEDIRDILKQLCAYKGVEIIEGHLMPDHIHMLVSIPPKMSVSSFMG YLKGKSSLMIFDRHANLKYKFGNRHFWSEGYYVSTVGLNEATIKKYIQDQEKYDIMQDKLSVKEYEDPFKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 5e-42 | 66 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 7e-42 | 66 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 5e-43 | 64 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 1e-42 | 62 |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 4e-37 | 55 |
