Gene Information

Name : SLG_09510 (SLG_09510)
Accession : YP_004834083.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1012325 - 1013824 bp
Length : 1500 bp
Strand : +
Note : -

DNA sequence :
ATGAACGCGCCTTATAATCCCGGCCTGCTCGAGCAATTGAAGCTTCGCTACGGCGCCGGCCCGGTGAAGATGCTCATCGG
CGCGGACTGGGTGGAAGCCGCGTCCGGTGAGACGTTCGAGACGCGCAATCCCTCCACGGGCGAGGTCATCGCGCATGTCG
CCGCGGCAGGCGATGCGGACATCGATCGGGCCGTCGCCGCCGCGCGCGCCGCTTTCGAGGGCCCCTGGTCGAAAGTGAAG
CCCGCCGAGCGCGCCAACATGCTGCTTCGCCTCGCCGATCTCATCGAGGCCAATGCCGAGGAGCTCGCTCTGCTGGAGAC
GCTGGACGTCGGCCGGCCGATCCAGTTCTCGCGCATGCTCGATGTCGGCGGCGCGGTCGGCCAGTTGCGCTACAATGCCG
GCTGGGCGACCAAGATCTACGGCGAGACGGCCGAGATCAGCGCGCCGGGCGAATGGCTCTCTTATGTGCTGCGCGAGCCG
GTGGGCGTGTGCGCGCAGATCGTGCCGTGGAATTTCCCGCTCGTCATGGCGGTCGGCAAGCTCGCGCCCGCGCTGGCGGC
CGGTTGCACCGTCGTCCTCAAGCCTGCCGAGCAGACGCCGCTCAGCACGCTGCGGCTGGGCGAGCTGGCGCTGGAGGCAG
GCATTCCCGAAGGCGTGCTCAACATCGTGAGCGGCCTTGGCCGCACGGCCGGCGCGGCGCTGGCGGCGCATCCGGGCATC
AACAAGATTTCCTTCACCGGATCGACCCAGACCGGCAAGGCGATCATCGAGGCGTCGAAGAGCAATTTCGCGCGCGTGCA
GCTGGAGCTGGGCGGCAAGTCGCCCACCTTCATCTTCGCCGATGCCGATCTGTCCCGGGCCATCCCGGCCGCCGCCATGG
GCATCTTCTTCAATGCCGGGCAGGTCTGCGCCGCCGGCTCGCGCCTGTTCGTGCATGAGAAGGTGGCCGATGCGGTGCTG
GAAGGCGTGGTCAACATGGCGAAGGGCATGAAGGTCGGCCAGACGCTGGAAGCCGATACGATGATCGGCCCGCTCGTCAG
CGCCGCGCAGCTCGATCGCGTGACCGGCTACATCGCTGCCGGCCGCGAGGAAGGCGCGAACATCCTCGTGGGCGGCGAGC
GGATCGGCGAGGAAGGCTATTTCGTCCAGCCGACCGTGCTGCTCGACACCAAGGCCGACATGCGGGTGCGCAAGGAGGAA
ATCTTCGGCCCGGTGCTTTGCGCCATGCGGTTCGGCGACGATGATGATGTCGATGCGCTGGCGGGTCGCGGCAACGAGAC
GGAGTTCGGCCTCTCCGCGTCCATCTTCACGCAGAACATCTCGACCGCGCACAAGCTCGCCCGGCGCCTGAAGGCCGGCA
CGGTGCGCATCAACGGCTCGGGCGGTGTCGATCCCGCGCTGCCGCTCGGCGGCTTCAAGGCCTCCGGCTGGGGACGCGAA
AACGGCAAGGCCGGCATCGAGGCCTATACCGAGCTCAAGGCCGTGAGCGTCTCGCTCTGA

Protein sequence :
MNAPYNPGLLEQLKLRYGAGPVKMLIGADWVEAASGETFETRNPSTGEVIAHVAAAGDADIDRAVAAARAAFEGPWSKVK
PAERANMLLRLADLIEANAEELALLETLDVGRPIQFSRMLDVGGAVGQLRYNAGWATKIYGETAEISAPGEWLSYVLREP
VGVCAQIVPWNFPLVMAVGKLAPALAAGCTVVLKPAEQTPLSTLRLGELALEAGIPEGVLNIVSGLGRTAGAALAAHPGI
NKISFTGSTQTGKAIIEASKSNFARVQLELGGKSPTFIFADADLSRAIPAAAMGIFFNAGQVCAAGSRLFVHEKVADAVL
EGVVNMAKGMKVGQTLEADTMIGPLVSAAQLDRVTGYIAAGREEGANILVGGERIGEEGYFVQPTVLLDTKADMRVRKEE
IFGPVLCAMRFGDDDDVDALAGRGNETEFGLSASIFTQNISTAHKLARRLKAGTVRINGSGGVDPALPLGGFKASGWGRE
NGKAGIEAYTELKAVSVSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-64 45
hpaE AAO17179.1 HpaE Not tested tcd island Protein 5e-63 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-62 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-65 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-65 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-65 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLG_09510 YP_004834083.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 2e-62 41