Gene Information

Name : SLG_09210 (SLG_09210)
Accession : YP_004834053.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 977641 - 978399 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGATCACTCTCTCTCAGGTCAGCAAGAGCCATGGCGAGCGCCGCGCGCTCGACGATGTGACGCTCGCCATCGAGAGCGG
ATGCTTCCTCGCCATCGTCGGACAGTCGGGCGCGGGCAAGACGACCTTGCTCAAGGCGATCAACCGGCTGGCCGATATCG
ATAGCGGGCAAATCATGGTGGATGGCGAGGATGTGAGTGCCCAGCCGCTCGCCGCGCTGCGCCGCCGGATCGGCTATGTG
TTCCAGGGCATCGGGCTCTTCCCGTACATGAGCGTCGCGGAGAATATCTGGCTGGTGCCGCGCCTGCAGGGCATGGCCCG
CGCGGGGCGGGAGGCGCGGGTCGCCGAGCTGCTGGCACTCGTCTCGCTGCCGGCGGATTTCGCGGAGCGCTATCCGGCGC
AGCTTTCCGGCGGGCAGGCGCAGCGCGTCGGCTTCGCGCGGGCGCTGGCGGCGGGCCCCTCGATCATGCTGATGGACGAG
CCTTTCGGTGCGCTCGACCCGGTCACGCGCGCCGAGCTCGGCACGGCCTATCGCGCGCTGCACGATCGGCTCGGCCTCAC
CAGTCTGCTCGTGACGCATGACATGAGCGAAGCGCTGCTGCTCGCGGATCGCGTCATCGTGATGGACGAGGGGCGGGTGC
TGGCCGACATGACGCCCCGCGCGCTGATCCGTCACCGGGGCGATCCGCGCATCGACGCGATGCTGGACGCGGCGCGCCGC
GCAGCCGCTGCCCTCGAAGCCCTGGCGCGCGACGCATGA

Protein sequence : 
MITLSQVSKSHGERRALDDVTLAIESGCFLAIVGQSGAGKTTLLKAINRLADIDSGQIMVDGEDVSAQPLAALRRRIGYV
FQGIGLFPYMSVAENIWLVPRLQGMARAGREARVAELLALVSLPADFAERYPAQLSGGQAQRVGFARALAAGPSIMLMDE
PFGALDPVTRAELGTAYRALHDRLGLTSLLVTHDMSEALLLADRVIVMDEGRVLADMTPRALIRHRGDPRIDAMLDAARR
AAAALEALARDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-40 45
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-40 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLG_09210 YP_004834053.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-19 45