Gene Information

Name : phoB (SLG_08880)
Accession : YP_004834020.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 941511 - 942206 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCGGGCGAAAATGCTCCTGGTCGAGGATGATGCCGCGCTGGCCGAACTCCTGACCTGGCATTTCCAGCGGGAGGA
CTTCGACGTCGCGCAGACGCCCGACGGCGAGGAAGCGCTGATCCTGGCTCAGGAACGGACGCCGGACATCGTCCTGCTCG
ACTGGATGGTCGAGAATCTCTCGGGAATCGAGGTTTGCCGGAGATTGCGCCGCATGCCGGAGACGGCGAACGTGCCCATC
ATCATGCTGACCGCGCGCGGCGAAGAAGAGGACCGGGTTCGCGGCCTCGAAACCGGCGCCGACGATTATGTGACCAAGCC
CTTCTCGCCGCGCGAGCTGATCGCCCGGGTCAATGCCGTGCTCCGCCGCGTGCGGCCGGCGCTGGCCGGTGAAGTCCTCA
CCTTCGGCGATCTCGAAATGGACACGGTCGCGCACAAGGTCCGGCGCGGCGGCGAACTCGTGCCGCTCGGCCCGACGGAG
TTCCGGCTTCTGCGTCACCTGCTCGAGCATCCCGGCTGGGTCTTCTCCCGCGAGCGCCTGCTGGACAGCGTCTGGGGGCA
GGACAGCGAGATCGAACTGCGCACCGTGGACGTCCACATCCGTCGCTTGCGCAAGGCGATCAATGCGAACGGACGGCCGG
ACATCATCCGGACCGTTCGATCCGCAGGCTATTCCCTGGACGCCGACGCCGTCTGA

Protein sequence :
MARAKMLLVEDDAALAELLTWHFQREDFDVAQTPDGEEALILAQERTPDIVLLDWMVENLSGIEVCRRLRRMPETANVPI
IMLTARGEEEDRVRGLETGADDYVTKPFSPRELIARVNAVLRRVRPALAGEVLTFGDLEMDTVAHKVRRGGELVPLGPTE
FRLLRHLLEHPGWVFSRERLLDSVWGQDSEIELRTVDVHIRRLRKAINANGRPDIIRTVRSAGYSLDADAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-29 42
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 3e-26 42
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 8e-26 42
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 8e-26 42
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 8e-26 42
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 8e-26 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB AE000516.2.gene3505. Protein 2e-34 46
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_012469.1.7685629. Protein 3e-35 44
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_012469.1.7686381. Protein 1e-39 44
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene2815. Protein 2e-38 42
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_010410.6002989.p0 Protein 1e-33 42
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_010400.5986590.p0 Protein 1e-33 42
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_011595.7057856.p0 Protein 1e-33 42
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB AE015929.1.gene1106. Protein 8e-28 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene1528. Protein 9e-31 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_002952.2859905.p0 Protein 2e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_002758.1121668.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_007622.3794472.p0 Protein 2e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_009641.5332272.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_013450.8614421.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_007793.3914279.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_002745.1124361.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_009782.5559369.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_002951.3237708.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_003923.1003749.p0 Protein 3e-36 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB NC_008702.1.4607594. Protein 3e-34 41
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB BAC0197 Protein 6e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB VFG1389 Protein 2e-30 44
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB VFG1702 Protein 7e-30 42
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB VFG1390 Protein 8e-36 42
phoB YP_004834020.1 phosphate regulon transcriptional regulatory protein PhoB VFG1563 Protein 1e-29 41