Gene Information

Name : SLG_08010 (SLG_08010)
Accession : YP_004833933.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Resistance
Product : OmpR family two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 853020 - 853673 bp
Length : 654 bp
Strand : +
Note : -

DNA sequence :
ATGCGGATCCTCCTCGTCGAAGACGAACCCGCGCTCGCGCAGCGCGTGACGGCCAATCTGGCCCGTCACGGCATGACCTG
CGAATGGCTGTCGAACGCGGAGGATGCGCTCGATTTCGCGAGCGATGGTTTCACCGTTCTGGTCGTGGATGTCGGCTTGC
CGGGCATGTCCGGCATCGATCTGGTTCGGGCGTTGCGCGCGCGGTCGCTGGCGACGCCGATCCTCATCCTCACCGCCCGC
AGCAGCTGGGAAGAGAAAGTGGAGGGGCTCAATGCCGGCGCGGACGACTTCATCGTCAAGCCGGTGCGCACGGAGGAGCT
GGTCGCGCGCCTCCATGCGCTGGCCCGCCGCGCCTTCGGGCACAGCGCGACGCGGATCGCTGTCGGCGCCATCGCGATCG
ATACGGCGAGCGGCGAGGCCTGGCTCGACGATGCACCGCTGGCGCTCACCGCCAGCGAATTCCGCCTCCTGCAGATGCTG
GCCTACCGGGCCGGGCGGACGCTGACGCGGCAGGCAATCCTCGACAATCTCTACAGCCTCGCCAGCGAGCGGGACGAGAA
TGCTATAGAGGTGCTGGTCGGACGCCTGCGCCGTAAGATCGGCCGCGAGCGGATCGTGACCGTGCGCGGCCTTGGCTATC
GGCTGGAGGCATGA

Protein sequence :
MRILLVEDEPALAQRVTANLARHGMTCEWLSNAEDALDFASDGFTVLVVDVGLPGMSGIDLVRALRARSLATPILILTAR
SSWEEKVEGLNAGADDFIVKPVRTEELVARLHALARRAFGHSATRIAVGAIAIDTASGEAWLDDAPLALTASEFRLLQML
AYRAGRTLTRQAILDNLYSLASERDENAIEVLVGRLRRKIGRERIVTVRGLGYRLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLG_08010 YP_004833933.1 OmpR family two-component system response regulator NC_002516.2.879194.p Protein 7e-36 45