Gene Information

Name : SLG_06450 (SLG_06450)
Accession : YP_004833777.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 670255 - 670944 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGCATGCCACCGCCGCGCCCACCACTATCGCGATCCGCGCGCGCGATGTCACCCTTTCCCTTGGCGCCACTGAAATCCT
GAAAGGCATAGACCTCGACATCGTGAACGGGGAAAGCCTCGCCATCCTGGGCGCATCGGGATCGGGCAAGTCATCGCTGA
TGGCGGTGCTCTCCGGCCTCGAGCGCGCCAGCGGCGGCACGGTGAGCGTGGCCGGCACCGATTTCGGCGCGCTGGACGAG
GACGCGCTTGCCCGCGCCCGGCGCGGCCGCATCGGCATCGTACTGCAATCCTTCCACCTCCTGCCGACGATGACGGCGCT
GGAGAATGTCGCAGTGCCGCTGGAGCTGGCCGGGCATGACGACGCCTTCGGCCGAGCGGGCGAGGAACTGCACGCCGTGG
GGCTCGGGCATCGGCTCGACCATTATCCCGCCCAGCTTTCCGGCGGCGAGCAGCAGCGCGTCGCCATTGCCCGCGCCATG
GCGCCGGGCCCCGCCATCCTCTTCGCGGACGAACCGACCGGCAATCTCGATGCCGCCACCGGCGCCGCCGTAGTCGAGCT
GCTGTTCGGCCGCCAGCAGGCGACGGGCGCGACCCTTCTCATCATCACTCATGATCCGGGGCTCGCGGCGCGCTGCGACC
GCATTCTGGAAATGCGCGACGGGCGCGTGATCGCCGAGCGGCGCGCGTGA

Protein sequence : 
MHATAAPTTIAIRARDVTLSLGATEILKGIDLDIVNGESLAILGASGSGKSSLMAVLSGLERASGGTVSVAGTDFGALDE
DALARARRGRIGIVLQSFHLLPTMTALENVAVPLELAGHDDAFGRAGEELHAVGLGHRLDHYPAQLSGGEQQRVAIARAM
APGPAILFADEPTGNLDAATGAAVVELLFGRQQATGATLLIITHDPGLAARCDRILEMRDGRVIAERRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLG_06450 YP_004833777.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-29 48
SLG_06450 YP_004833777.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-28 43
SLG_06450 YP_004833777.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-30 42