Gene Information

Name : hemC (SLG_00500)
Accession : YP_004833182.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 46173 - 47114 bp
Length : 942 bp
Strand : +
Note : protein synonym:hydroxymethylbilane synthase; protein synonym:pre-uroporphyrinogen synthase

DNA sequence :
ATGACCAGCCTCTTCCCCGATCCCGACCGGCCCTTCCGCCTTGGTACGCGCGGCTCGCCCCTGGCGCTCGCCCAGGCGGA
GCTGACCATCGCGGCCCTGATCGCCGCGCATGGCTGGCCGCGCGAAGCAATCCGCATCGTGACGGTCTCCACCAGCGGCG
ACCGCATTCAGGACAGGCCGCTCGCCGAGCTTGGCGGCAAGGCGCTGTGGACGAAGGAGCTGGATCGCGCCTTGCTGGAA
GGCGAGATCGATTGCGCCGTGCACTCGATGAAGGATGTGGAGACGATCCGGCCGGAGACGATCGCCATCGCCGCCATGCT
GCCGCGGGCAGCCACGCAGGATCGCCTCATCGGCGCCCCGTCCATCGCGGCGATCCCCGAGGGTGCGGTGATCGGCACGA
GCTCGCCACGCCGGGCGGCGCAGATGAAGGCGTTGCGGCCGGATCTCCGCACGAGCCTGCTGCGCGGCAATGTGGCGACG
CGCCTTGCCCGGGTGGACAGTGGCGACATCGATGCCACGCTGCTTGCCGCGGCGGGGCTCGACCGGCTCGGCCTTGGCGA
CGTGGGGACGACGATTCCGCCGGAAACGCTCCTGCCGGCTGTGGCGCAAGGCGCGGTCGGCATTGAATGCCGGGCGGACG
ATGCCGTGGCCCGCGGCCTGCTTCAGGCGATCGGCGATGCGGCCACCGAGGCCTGCGTGCGTGCCGAGCGCGCGCTGCTG
CTGGCGCTCGGCGGAAGCTGCCACAGCCCCATCGCGGCACTCGCGCAACTCGACGGCGGCAGGATCCGCCTGCGCGCGCA
GATTCTGAGCGAGGACGGCTCCGAACAGGTGAGCCGCGAGACGATGCTGCCGGCGAACGCTCCGGAGGCCGGTGCCATGG
CGCTCGGCAAGGAACTGCTCGACGAAGCCAGCCCCGCGCTGCGGGCGCTCTTCCATCCATGA

Protein sequence :
MTSLFPDPDRPFRLGTRGSPLALAQAELTIAALIAAHGWPREAIRIVTVSTSGDRIQDRPLAELGGKALWTKELDRALLE
GEIDCAVHSMKDVETIRPETIAIAAMLPRAATQDRLIGAPSIAAIPEGAVIGTSSPRRAAQMKALRPDLRTSLLRGNVAT
RLARVDSGDIDATLLAAAGLDRLGLGDVGTTIPPETLLPAVAQGAVGIECRADDAVARGLLQAIGDAATEACVRAERALL
LALGGSCHSPIAALAQLDGGRIRLRAQILSEDGSEQVSRETMLPANAPEAGAMALGKELLDEASPALRALFHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-36 41
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-36 41