Gene Information

Name : SLG_38420 (SLG_38420)
Accession : YP_004836974.1
Strain : Sphingobium sp. SYK-6
Genome accession: NC_015976
Putative virulence/resistance : Virulence
Product : NarL family two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4132230 - 4132850 bp
Length : 621 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTGATCGCAAGCTCATCCATATAGTCGACGATGAAGAGTCCATCCGGAAGTCCACCGGCTTCCTGCTGCGGACCTC
CGGCTATTCCGTGGAAACCTGGGCCTCCGGCACCGCTTTCATCAAGGAAGTGCGGCAAGCGGAACATGGCTGCGTGCTGC
TCGACATCCGCATGCCGGGGATGGATGGGCTGGAGGTGCAGCAGGCCCTCGCCGACATGGGCGTGACCATGCCTGTGGTC
ATCATGACCGGCCATGGCGATATCCCGATCGCCGTCCGCGCCATGAAGGCCGGCGCCGTCGACCTGCTTGAAAAGCCCTT
CGAGAAATCAGCGCTGCTTCGCGCCATCGAGGAAGGGTTCGCACGCATGGCGGCGGCGGACAGCGCCAGCAGCAGCGCGC
GCGATGCCGAGGTGCGGCTCGCCGCCCTCACACCCCGGGAACAGGACGTCCTGACCGGCCTTGCGAAGGGACTGCCCAAC
AAGACGATCGCCTACGACCTCGGCATTTCGCCGCGCACGGTCGAAGTGCATCGCGCCAACCTCATGGTGAAGCTCGAGGT
ACGCAGTCTCTCGGACGCCTTGCGCATCGCCTTCGCCGCCGGCCTTGGCCTCGACGGCTAG

Protein sequence : 
MADRKLIHIVDDEESIRKSTGFLLRTSGYSVETWASGTAFIKEVRQAEHGCVLLDIRMPGMDGLEVQQALADMGVTMPVV
IMTGHGDIPIAVRAMKAGAVDLLEKPFEKSALLRAIEEGFARMAAADSASSSARDAEVRLAALTPREQDVLTGLAKGLPN
KTIAYDLGISPRTVEVHRANLMVKLEVRSLSDALRIAFAAGLGLDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 8e-29 41
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 1e-28 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 1e-28 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 1e-28 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLG_38420 YP_004836974.1 NarL family two-component system response regulator VFG0488 Protein 4e-29 41